- Research article
- Open Access
- Open Peer Review
Role of vitamin D receptor gene Cdx2 and Apa1 polymorphisms in prostate cancer susceptibility: a meta-analysis
BMC Cancervolume 16, Article number: 674 (2016)
Vitamin D receptor (VDR) gene polymorphisms affect the risk of prostate cancer. However, studies investigating the relationship between VDR gene polymorphisms (Cdx2 and ApaI) and prostate cancer risk are equivocal. Therefore, we conducted a meta-analysis of all the studies to review the evidence available.
A comprehensive search of PubMed, EMBASE, and ISI Web of Science for studies published until September 2015 was conducted. Odds ratios (ORs) and 95 % confidence intervals (CIs) were analyzed to determine the association between VDR Cdx2 and ApaI polymorphisms, and prostate cancer risk.
The meta-analysis included 10 studies involving 4979 cases and 4380 controls to analyze the VDR Cdx2 polymorphism. An additional 11 studies involving 2837 cases and 2884 controls were analyzed for the VDR ApaI polymorphism. Evidence failed to support the role of VDR Cdx2 and ApaI polymorphisms in prostate cancer. For Cdx2, the pooled OR was 1.11 (95 % CI = 0.93–1.33) for AA vs. GG genotypes, 0.97 (95 % CI = 0.88–1.06) for GA vs. AA genotypes, 0.99 (95 % CI = 0.91–1.08) for AA + GA vs. GG, and 1.12 (95 % CI = 0.95–1.31) for AA vs. GA + GG. No significant relationship was observed in any subgroup analysis based on ethnicity, controls, and Hardy–Weinberg equilibrium (HWE). ORs for the ApaI polymorphism were similar.
VDR Cdx2 and ApaI polymorphisms are not associated with prostate cancer. Additional evidence is required to confirm this conclusion.
Prostate cancer ranks second among cancers diagnosed worldwide and sixth among cancer-related deaths in males. In 2012, more than 1.1 million cases were newly diagnosed worldwide. Prostate cancer accounts for 15 % of all cancers in men, and nearly 759,000 are reported in developed countries. In 2012, prostate cancer ranked fifth among cancer-related deaths in men, accounting for nearly 307,000 deaths or 6.6 % of all cancer-induced deaths in males . Furthermore, the number of prostate cancers newly diagnosed annually is expected to climb to 1,853,391 worldwide by 2030, resulting in almost 544,209 deaths . Studies suggest that ethnicity, diet, aging, and genetic factors mediate the pathophysiology of prostate cancer [3–5]. Therefore, the prevalence of prostate cancer among African-Americans, Caucasians, and Asians varies .
The role of genetics in prostate cancer has been the focus of research attention in recent years. BRCA1 and BRCA2 mutations increase the risk for ovarian and breast cancer as well as prostate cancer . Hereditary prostate cancer gene 1 (HPC1), androgen and vitamin D receptors have been linked to prostate cancer . Genome-wide association studies [9, 10] reported several SNPs substantially increasing the risk of prostate cancer.
The role of testosterone and vitamin D in prostate cancer is mediated via vitamin D receptor (VDR). The hormonally active form of vitamin D1, 25-dihydroxyvitamin D, inhibits cancer progression . Vitamin D lowers the risk of several types of cancer, including prostate . VDR is encoded by a large gene (>100 kb) mapped to chromosome 12q12-14. Its 14 exons spanning approximately 75 kb [13, 14] exhibit a high degree of polymorphism, with at least 618 reported variants, most of which are either undetectable or occur at a low frequency in the general population. Among the known VDR polymorphisms, the most common SNPs, influencing the VDR expression in prostate cancer include FokI, BsmI, ApaI, Cdx2, and TaqI [15–18]. However, these associations between SNPs and prostate cancer are not proven. The role of BsmI, TaqI, and FokI polymorphisms in prostate cancer is not established [19, 20]. Similarly, ApaI and Cdx2 polymorphisms in prostate cancer risk are not validated [15, 16, 21–28]. For example, a case-controlled study showed a two-fold higher risk in Caucasian homozygous aa carriers for the variant ApaI compared with homozygous AA carriers . Torkko reported that the Cdx2 polymorphism significantly increased the prostate cancer risk among Hispanic populations carrying the SRD5A2 V89L VV genotype . However, a study conducted by Rowland found no relationship between prostate cancer and ApaI and Cdx2 SNPs .
The discrepancies may be attributed partly to statistical weakness, heterogeneity, population diversity, minimal effect of polymorphisms, and publication bias. We, therefore, investigated the role of VDR Cdx2 and ApaI polymorphisms in prostate cancer risk by conducting a meta-analysis of all the eligible case-controlled studies.
We searched PubMed, EMBASE, and ISI Web of Science databases for genetic association studies involving VDR ApaI and Cdx2 polymorphisms and prostate cancer susceptibility, published through September 2015. We used combinations of the following keywords: ‘prostate cancer’, ‘VDR’ or ‘vitamin D receptor’, ‘ApaI’ or ‘rs7975232’, ‘Cdx2’ or ‘rs11568820’, and ‘polymorphism’, ‘variant’, or ‘mutation’. Two independent investigators (Kewei Wang and Guosheng Wu) performed the search. Additional articles were retrieved via manual searches of reference lists in the studies identified initially. Our search was not restricted by publication date or language. Selected articles are listed in Table 1 with the following data: the first author, publication year, country, ethnicity, source of controls, number of cases and controls, polymorphisms, and Hardy-Weinberg equilibrium (HWE) (P value). Other eligible studies were retrieved for additional review and data extraction. All the investigators were qualified and trained in literature search, statistical analysis, and evidence-based medicine.
Inclusion and exclusion criteria
The inclusion criteria were: (1) studies evaluating VDR Cdx2 and ApaI polymorphisms and prostate cancer risk; (2) clinical studies; (3) case–control studies; (4) studies investigating diseases confirmed histologically, pathologically and/or radiologically; (5) adequate genotype distributions to facilitate estimation of OR with 95 % CI; and (6) most recent or complete studies. The exclusion criteria were:: (1) studies containing overlapping data; (2) missing genotype or allele frequencies; (3) absence of case controls; (4) studies not analyzing VDR Cdx2 and ApaI polymorphisms in prostate cancer susceptibility; (5) studies investigating progression, severity, phenotype modification, response to treatment, or survival; (6) inadequate data extraction; or (7) missing genotype frequencies.
ORs with 95 % CIs were used to measure the relationship between VDR Cdx2 and ApaI polymorphisms, and prostate cancer risk. The Z test was used to evaluate the significance of pooled OR. P value less than 0.05 was deemed significant. Homozygote, heterozygote, recessive and dominant models were used to determine the association of Cdx2 and ApaI polymorphisms with prostate cancer risk.
Statistical heterogeneity was evaluated using chi-square-based Q-statistic  and I2 statistic . P < 0.10 or I2 > 50 % suggested statistically significant heterogeneity. A random effects model was used to calculate the pooled OR estimates. In other cases, a fixed effect model was used .
Sensitivity and subgroup analyses were used to explore the sources of heterogeneity among studies. Sequential exclusion of individual studies facilitated the evaluation of stability and sensitivity of the results. Subgroup analyses were based on ethnicity, controls and HWE.
Begg’s funnel plots were used to determine publication bias in studies. Linear regression asymmetry was tested using the procedure described by Egger et al. . An asymmetric plot suggested possible publication bias. P value less than 0.05 in Egger’s test indicated significant publication bias.
The statistical tests were conducted using STATA statistical software (version 12.0 STATA Corp., College Station, TX). All P values were two-sided. The reliability and accuracy of the results were ensured by two authors independently evaluating the data with the same software.
The search terms returned 292 publications. We excluded 266 studies unrelated to Vitamin D receptor (VDR) gene polymorphism, three studies unrelated to prostate cancer [34–36], and three reviews [37–39]. The remaining 20 studies were included in the meta-analysis. We excluded two meta-analyses [20, 40], and two other studies [41, 42], which lacked genotype frequencies. No additional studies were retrieved following manual search of references in the published studies. Therefore, a total of 16 relevant studies were eligible for inclusion in the meta-analysis (Table 1). Three of the eligible studies reporting data involving two different ethnic groups were treated independently [25, 27]. Therefore, the final meta-analysis included a total of 19 case-controlled studies as shown in Table 1. Seven studies involved 4979 cases and 4380 controls related to VDR Cdx2 polymorphism and prostate cancer risk, and 11 studies involved 2837 cases and 2884 controls related to VDR ApaI polymorphism.
The sample size ranged from 28 to 1117 individuals. Six of the eligible studies involved Caucasians and four were conducted in other ethnic groups to investigate VDR Cdx2 polymorphism. VDR ApaI polymorphisms were investigated in Caucasians in four studies. Six studies involved Asians, and two involved African-Americans. Ten studies involved population samples, and six were hospital-based. PCR-RFLP and TaqMan assays were used to study the polymorphisms. The genotype distributions were not in HWE among the controls in two studies investigating VDR Cdx2  and VDR ApaI [15, 16, 43].
Primary and subgroup analyses
As shown in Table 2, VDR Cdx2 polymorphism was not significantly associated with prostate cancer risk in the pooled meta-analysis of all the eligible studies (homozygote model: AA vs. GG: OR = 1.11, 95 % CI = 0.93–1.33, P = 0.23; heterozygote model: GA vs. AA: OR = 0.97, 95 % CI = 0.88–1.06, P = 0.53; dominant model: AA + GA vs. GG: OR = 0.99, 95 % CI = 0.91–1.08, P = 0.80, Fig. 1; recessive model: AA vs. GA+ GG: OR = 1.12, 95 % CI = 0.95–1.31, P = 0.16). Subgroup analyses based on ethnicity, source of control, and HWE in controls, revealed no significant association.
As shown in Table 3, VDR ApaI polymorphism was not significantly correlated with prostate cancer risk in pooled analysis of eligible studies (homozygote model: AA vs. aa, OR = 0.97, 95 % CI: 0.76–1.25, P = 0.85; heterozygote model: Aa vs. aa: OR = 1.00, 95 % CI: 0.88–1.13, P = 0.99; dominant model: AA + Aa vs. aa: OR = 0.98, 95 % CI: 0.87–1.10, P = 0.79, Fig. 2; recessive model: AA vs. Aa + aa: OR = 0.97, 95 % CI: 0.85–1.01, P = 0.64). Subgroup analyses based on ethnicity, source of controls, and HWE in controls, revealed the absence of prostate cancer risk with VDR ApaI polymorphism.
Heterogeneity analysis and sensitivity analysis
Significant heterogeneity was found in AA vs. Aa genetic model of VDR ApaI polymorphism (P = 0.021, I2 = 51.1 %). Sensitivity analysis was conducted by excluding individual studies to determine heterogeneity. Sequential exclusion of individual case-controlled study revealed similar results statistically, indicating the stability and sensitivity of the meta-analysis (data not shown).
Population and subgroup analysis revealed no significant heterogeneity in terms of VDR Cdx2 polymorphism.
Symmetrical Begg’s funnel plots indicated the absence of publication bias in the overall meta-analysis (Fig. 3). Egger’s test results revealed no publication bias in studies investigatingVDR Cdx2 polymorphism (P = 0.67 for AA vs. GG; P = 0.24 for GA vs. GG; P = 0.34 for dominant model AA + GA vs. GG; and P = 0.248 for recessive model AA vs. GA + GG) and VDR ApaI (P = 0.80 for AA vs. aa; P = 0.78 for Aa vs. aa; P = 0.48 for dominant model AA + Aa vs. aa; and P = 0.14 for recessive model AA vs. Aa + aa).
Genetic polymorphisms play a key role in the pathophysiology of disease. Genome-wide association studies (GWAS) reported more than 90 common SNPs (minor allele frequency [MAF], 5 % or greater) with established relationship involving insignificant alterations (average per allele odds ratios [ORs]:1.1–1.3) in prostate cancer susceptibility [44–47]. Overall, the SNPs account for a third of the total inherited risk of prostate cancer [44, 45].
VDR is a nuclear receptor regulating bone mineral homeostasis, mammalian hair cycle, and compound detoxification. It has recently been found to prevent tumorigenesis by inhibiting cell proliferation and differentiation, and inducing apoptosis. Previous studies demonstrated that VDR gene polymorphisms, which include FokI, BsmI, ApaI, TaqI, and Cdx2, are associated with ovarian , skin , breast , and colorectal cancers .
The G-to-A polymorphism involving a Cdx2-binding site in the 1e promoter region, mediates VDR transcription in intestine . The strong binding of A allele with the Cdx2 transcription factor enhances transcriptional activity . Thus, Cdx2 regulates cellular proliferation and differentiation. The A allele frequencies varied in different ethnic groups: 74 % in Africans, 43 % in Asians, and 19 % in Caucasians .
Cdx2 polymorphism prevents osteoporosis . The ApaI polymorphisms (in intron 8) at the 3′ untranslated region (UTR) are in strong linkage disequilibrium (LD) . Nonetheless, the polymorphism does not alter the predicted amino acid sequence of the VDR, and often affects mRNA stability and the efficiency of protein translation . Several studies investigated the role of VDR Cdx2 and ApaI polymorphisms in prostate cancer risk, with inconclusive results. Therefore, we conducted a meta-analysis to establish the association between VDR Cdx2 and ApaI polymorphisms, and prostate cancer risk.
Our meta-analysis, including 6427 cases and 6039 controls from 16 case-controlled studies, evaluated the association between Cdx2 and ApaI polymorphisms, and prostate cancer risk. Our results suggest that these polymorphisms do not increase the risk of prostate risk in genetic models, which was consistent with a previous meta-analysis . However, our current meta-analysis included 6427 cases and 6039 controls from 16 case-controlled studies to obtain comprehensive results. Subgroup analysis based on ethnicity, source of control, and HWE in controls, showed no significant relationship between Cdx2 and ApaI polymorphisms, and prostate cancer risk in any comparative studies.
The role of VDR Cdx2 and ApaI polymorphisms in prostate cancer was unclear due to ethnic variation in genotypes, controls and subjects, and genotyping techniques . The VDR Cdx2 AA genotype is most frequently found in African-Americans (58.9 %) , while the GG genotype occurs most frequently in Hispanic Whites (65.7 %) .
The VDR ApaI genotype AA is the most prevalent in African-Americans (40.2 %) , while the aa genotype is most frequently found in Asians (67.9 %) . However, the African study sample included three studies involving African-Americans, preventing statistical interpretation with confidence. A larger sample size is needed for subgroup analysis of various ethnic populations.
Furthermore, a few hospital-based studies did not support the association of increased risk with VDR polymorphisms compared with normal controls [57, 58], in contrast to other investigations [21, 59]. In subgroup analyses by source of control, we selected 16 studies (eight studies related to VDR Cdx2 polymorphism and eight involving VDR ApaI polymorphism) which included subjects from more representative populations to determine potential gene association in tumorigenesis.
The relationship between VDR Cdx2 and ApaI polymorphisms, and prostate cancer risk in previous studies is attributed to differences in lifestyle and disease prevalence as well as limited sample size [60–62]. Further, prostate size, cancer stage, and depth of invasion were not considered, in determining the genotypic distribution. Prostate cancer is a complex and multifactorial disease mediated by genetic and environmental factors in different populations .
However, the risk factors underlying prostate cancer are related to each other. Similar gene polymorphisms may still result in different phenotypes, because the penetrance of the mutation depends on the interaction with other polymorphisms and exposure to specific environment.
Genetic heterogeneity in meta-analysis of studies investigating genetic polymorphisms and various diseases is not surprising. However, no heterogeneity was observed among studies investigating the VDR Cdx2 polymorphism in our meta-analysis. Different genotype distributions and population stratification may also alter genotype-phenotype associations.
Furthermore, a number of factors affect heterogeneity. Different studies select subjects for control groups based on different definitions, resulting in heterogeneity observed in our meta-analysis. We investigated whether the heterogeneity might be explained by potential confounding factors such as age, smoking, drinking, androgen levels, and other clinical characteristics. However, no reliable results were available due to lack of access to individual data involving these variables. Similar heterogeneity was observed with the VDR ApaI polymorphism.
Cancer is a complex disease, and is triggered by genetic factors as well as environmental impact (UV exposure), gene interactions, and lifestyle (e.g., smoking, drinking alcohol, and diet) [63–71]. Interaction between environmental factors and VDR gene is also a possibility [70, 72]. Further large studies investigating the different types of VDR Cdx2 and ApaI polymorphisms are needed to facilitate subgroup analyses. Environmental interaction with VDR Cdx2 and ApaI polymorphisms and its role in prostate cancer risk needs to be validated.
The study limitations of our meta-analysis are as follows. First, in subgroup analyses based on ethnicity, the population sample size was comparatively small, which may affect the statistical power in determining the significance of the relationship. Second, our results were not adjusted for variables such as age, smoking, drinking, obesity, gene-gene interactions, and environmental factors, due to lack of access to the original study data. Finally, most studies investigating the VDR Cdx2 polymorphism in prostate cancer risk involved Caucasian population. Therefore, evidence based on large controlled studies involving a wide range of ethnic and population groups is needed to re-evaluate the association between specific SNPs and prostate cancer risk.
Our findings suggest that VDR Cdx2 and ApaI polymorphisms are not linked to prostate cancer susceptibility in the overall population. Epidemiological studies with large sample sizes including a wide range of ethnic populations and functional parameters are needed to reinforce our findings.
Vitamin D receptor
Hereditary prostate cancer gene 1
Polymerase chain reaction - restriction fragment length polymorphism
Single nucleotide polymorphism
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We thank Zihui Tan from the Department of Bioinformatics of Tongji University, and Jie Hu from the Department of Biology, Fudan University, for their assistance with literature search.
This study was supported by the young teachers’ startup fund for scientific research at Jiangnan University (JUSRP11569), the plan of public health research center of Jiangnan University (JUPH201508) and the project of Wuxi science and technology supporting plan (WX0302-B010507-150016-PB).
Availability of data and materials
KWW and WTS conceived and designed the study, KWW, GSW, JPL and WTS participated in study selection, data extraction and statistical analysis. KWW and WTS were involved in manuscript drafting and revision. All authors approved the final manuscript for submission and publication.
The authors declare that they have no competing interests.
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