Potential genetic modifiers for somatic EGFR mutation in lung cancer: a meta-analysis and literature review
BMC Cancer volume 19, Article number: 1068 (2019)
Accumulating evidence indicates inherited risk in the aetiology of lung cancer, although smoking exposure is the major attributing factor. Family history is a simple substitute for inherited susceptibility. Previous studies have shown some possible yet conflicting links between family history of cancer and EGFR mutation in lung cancer. As EGFR-mutated lung cancer favours female, never-smoker, adenocarcinoma and Asians, it may be argued that there may be some underlying genetic modifiers responsible for the pathogenesis of EGFR mutation.
We searched four databases for all original articles on family history of malignancy and EGFR mutation status in lung cancer published up to July 2018. We performed a meta-analysis by using a random-effects model and odds ratio estimates. Heterogeneity and sensitivity were also investigated. Then we conducted a second literature research to curate case reports of familial lung cancers who studied both germline cancer predisposing genes and their somatic EGFR mutation status; and explored the possible links between cancer predisposing genes and EGFR mutation.
Eleven studies have been included in the meta-analysis. There is a significantly higher likelihood of EGFR mutation in lung cancer patients with family history of cancer than their counterparts without family history, preferentially in Asians (OR = 1.35[1.06–1.71], P = 0.01), those diagnosed with adenocarcinomas ((OR = 1.47[1.14–1.89], P = 0.003) and those with lung cancer-affected relatives (first and second-degree: OR = 1.53[1.18–1.99], P = 0.001; first-degree: OR = 1.76[1.36–2.28, P < 0.0001]). Familial lung cancers more likely have concurrent EGFR mutations along with mutations in their germline cancer predisposition genes including EGFR T790 M, BRCA2 and TP53. Certain mechanisms may contribute to the combination preferences between inherited mutations and somatic ones.
Potential genetic modifiers may contribute to somatic EGFR mutation in lung cancer, although current data is limited. Further studies on this topic are needed, which may help to unveil lung carcinogenesis pathways. However, caution is warranted in data interpretation due to limited cases available for the current study.
Lung cancer is the most frequently diagnosed cancer and also the leading cause of cancer-related deaths over the world . Despite advances in molecular, pathological and biological research, the pathogenesis of lung cancer has not yet been fully elucidated. Though the predominant risk factor, smoke exposure has widely differing attribution to lung cancer risk across different ethnicities, e.g. over 80% in both males and females in the US  and UK , but only 57.5% in males and 11.5% in females in China . These significant differences indicate lung cancer aetiology is significantly impacted by other risk factors including inherited susceptibility.
Family history is a simple substitute for genetic susceptibility, easily assessed and less technologically demanding (although limited by societal differences in family size). Multiple epidemiological studies [5,6,7,8,9] demonstrated that family aggregation of malignancies would increase individuals’ lung cancer risk. Some critics argued that the family aggregation of lung cancer might have resulted from a shared environment, such as smoking exposure among family members; because most of the cancers clustering in probands’ families are smoking-related , and gene-smoking interactions could not be neglected in lung tumorigenesis . However, evidence on the heritability of lung cancer is also accumulating. Epidemiologically, family history of lung cancer still had a significantly increased risk in never-smoker probands , especially in Asians after adjusting confounders including smoking [9, 12]. Genetically, recent genome-wide association studies (GWAS) or sequencing studies of lung cancer unveiled a role of inherited susceptibility component overriding that of smoking behaviour . Some significant risk loci have been found to be genome-wide significantly associated with never-smoker lung cancers [14, 15].
Recently, many potential cancer predisposition genes (CPGs) or susceptibility loci have been revealed by investigating familial lung cancers or lung cancer-clustering families. However, the currently uncovered CPG mutations have been estimated to attribute to only ~ 3% of all cancers . Relevant evidence on CPGs is much more limited compared to somatic mutations in the era of whole-genome sequencing [16, 17].
Since its first discovery in lung adenocarcinoma in 2004, somatic EGFR mutation - one of the most important and targetable driver mutations found in non-small cell lung cancer (NSCLC) - has been extensively validated as an effective indicator of sensitivity to EGFR tyrosine kinase inhibitors (TKIs), as well as a prognosticator for patients . It is confirmed that exon 19 deletion and L858R point mutation in exon 21 are the most frequently mutated subtypes (the “common mutations”), accounting for 45 and 35% of all the EGFR-mutated NSCLC cases, respectively . Rare mutations have less evidence on TKI sensitivity and clinical responsiveness than the common ones, while some consensus has been achieved via individual or selective analysis: mutations occurring within exons 18 to 21 usually confers sensitivity to EGFR TKIs, except those within exon 20, such as T790 M and exon 20 insertions . It’s of note, EGFR-mutated lung cancers generally have a different epidemiological profile from the EGFR wild-type ones, the former more likely to be non-smokers (vs smokers: 37.6%~ 62.5% vs 8.4%~ 35.9% varying by ethnicity), East Asians (vs Westerns: 47.9% vs 19.2% in ADCs) and lung adenocarcinomas (vs SCCs: 47.9% vs 4.6% in Asians) [20,21,22], which may indicate distinct modulations of relevant variables in tumorigenesis.
Since lung cancers with a family history may indicate a potentially differed genetic background from sporadic cases, it is interesting to investigate if there is a relationship between family history of cancer and EGFR mutations in lung cancer patients, both of which participate in tumorigenesis. To date, observational studies reported conflicting relationships, either positive or neutral, between family history and the presence of EGFR mutation in lung cancer patients. Given the contradictory epidemiological findings and the potential implication in lung carcinogenesis, we conducted a meta-analysis to pool the risk estimates from previous studies focusing on family history of cancer and somatic EGFR mutation; then by a second literature research, we summarized familial lung cancer cases with both potential CPGs and somatic EGFR mutation status reported to help to throw a light on this topic.
Meta-analysis of family history on somatic EGFR mutation
We followed the guidelines of the Meta-analysis of Observational Studies in Epidemiology (MOOSE) group for reporting . We searched PubMed, EMBASE, Web of Science and Cochrane Library by using a combination of free text and medical subject heading (MESH) terms related to lung cancer, EGFR and family history (Detailed searching strategies in Additional file 1: Table S1). Hand searching the bibliography of relevant articles was also used.
Our inclusion criteria were as follows:  Case-control study, cohort study and other studies of lung cancer patients with EGFR mutation status detected/reported ; Odds ratios (in case-control studies), relative ratios (in cohort studies) reported relative to a family history of cancer, or of sufficient information to calculate them. If there were several eligible publications derived from the same dataset, the one with the largest sample size was included. Studies with limited or incomplete data including case studies, studies with only EGFR mutant cases or incomplete information associating with both EGFR mutation status and family history were excluded.
Two independent authors (YIC and YCG) first reviewed all the titles/abstracts to find the potentially related studies, then had a full view of these potentially related studies and selected the eligible studies based on the inclusion/exclusion criteria above. Any discrepancies were resolved by consensus after discussion.
The two reviewers independently extracted information concerning study design, year of publication, study size, study duration, inclusion/exclusion criteria, subjects’ characteristics (age, gender, ethnicity, lung cancer histology, smoking status, family history of lung cancer/other cancer in first/second-degree relatives) at the diagnosis of lung cancer, EGFR mutations and detection methods, odds ratio (OR) or risk ratio estimates and the corresponding 95% CIs. The Newcastle-Ottawa scale was used to assess the quality of each included study .
Forest plots were generated for meta-analytic estimates by using Mantel-Haenszel (MH) method and random-effects models. Inverse Variance (IV) method was used when only estimates and their standard errors were available in the original studies. Heterogeneity was assessed by using Cochran’s Q and I2-statistic. To test the robustness of the estimates, we performed a sensitivity analysis by subgrouping studies. Publication bias was evaluated by applying the funnel plot . We used RevMan 5.3 to perform all the analysis.
Literature research for underlying mechanisms on somatic EGFR mutation
To further elucidate the topic, we searched PubMed and Web of Science Core Collection using a combination of keywords and/or MeSH terms associating with “lung cancer”, “family history” and “germline mutation” (detailed searching strategies in Additional file 1: Table S2). Then we concluded current papers associating with lung cancer-clustering families which reported their tumour somatic EGFR mutation status. Our inclusion criteria were: 1) potential CPGs were investigated and reported in the index case of lung cancer; 2) CPGs were also detected and validated in other family members besides the proband; 3) somatic EGFR mutations were reported in the lung tumours in the probands and/or other family members. No ethical approval was needed for the current study.
After removing duplicates and the initial screening of titles and abstracts, 120 papers were potentially related and undergone through a full-text review. Ninety-two papers had incomplete or limited data, fifteen were meeting abstracts, one was non-English, and another studied the same population as one of the eligible papers (more detailed information in the latter). Thus, 11 original studies were included (Fig. 1). Quality assessment results of each study were shown in Additional file 1: Tables S3-S4.
Table 1 showed the main characteristics of the studies included in the current meta-analysis [25,26,27,28,29,30,31,32,33,34,35]. Ten of them were cohort studies and one was a case-control study. Most of the studies focused on non-small cell lung cancers (NSCLCs) or lung adenocarcinomas (ADCs). There were quite a number of differences in definitions of EGFR positive mutation and family history, detection methods and composition of the study population. Due to a very high heterogeneity by pooling all the studies (I2 = 78%, P < 0.000), we performed the funnel plot and excluded the outlier study by Cheng et al. (2015)  in our analysis afterwards (Additional file 1: Figures S1-S2).
Figure 2 provided the “overall” likelihood of EGFR mutation status in lung cancer patients with family history of any cancer (FH_Any) compared to those without from the remaining ten studies. “Overall” estimates of FH_Any here referred to the total effects by pooling the studies without differentiating family history of all cancers, lung cancer or other non-lung cancers. There was a marginal significance (OR = 1.23[1.00–1.50], P = 0.05) with an intermediate heterogeneity among studies (I2 = 47%, P = 0.05). When restricted to Asian countries (eight studies), the difference became significant (OR = 1.35[1.06–1.71], P = 0.01) (Fig. 2a). In lung adenocarcinoma (ADC) patients with FH_Any, EGFR was more likely mutated than those without (OR = 1.47[1.14–1.89], P = 0.003) (Fig. 2b). Marginal significance was also observed in patients with cancer in their first-degree relatives than their FH_Any-absent counterparts (OR = 1.37[0.99–1.89], P = 0.06) (Fig. 2c). However, there were no significant findings when limiting patients to females, never-smokers or those having FH_Any yet with both their first- and second-degree relatives included, possibly due to much less data in these subgroups.
There was a significantly higher proportion of EGFR mutation in patients with family history of lung cancer (FHLC) than those without (OR = 1.53[1.18–1.99], P = 0.001) (Fig. 3a), including in analyses limited to those who had lung cancer in their first degree relatives (OR = 1.76 [1.36–2.28], P < 0.0001) (Fig. 3a). The association between EGFR mutation and FHLC-positive cases remained significant when limited to those diagnosed as NSCLCs (OR = 1.86[1.35–2.57], P = 0.0001) (Fig. 3b). Only one study reported data of EGFR mutation specifically in ADC patients with FHLC, which indicated a significantly higher possibility of mutation than those absent of FHLC (OR = 1.51[1.04–2.19], P = 0.03). The association between the two variables was not altered greatly if only Asian patients were included (Data not shown since neither of the two excluded non-Asian studies showed significant results). Further subgroup analysis of EGFR mutation status in patients with/without FH of all cancers or other non-lung cancers did not demonstrate any remarkable difference between subgroups tested (Data not shown).
Results of the second literature search
In total, there were 41 lung cancer cases in 29 families eligible for our second analysis (Tables 2 and 3). The median onset age was 57 years-old (range 22–78). Females (31/41, 75.6%) and never-smokers (24/41, 58.5%) predominated in the curated cases. Almost all (35/41, 85.3%) of the histology in lung cancer patients were ADCs; the remaining five patients were diagnosed as NSCLCs (uncategorized) and another one was SCC. In this dataset, there were eight White and seven Asian families. Five of the White families inherited the EGFR gene; while CPGs in the Asian families were more scattered (but report bias could not be excluded here).
Fourteen families (of 29, 48.3%) reported germline EGFR mutations, and eight of them carried the T790 M mutation [36,37,38,39,40,41,42]. Other germline EGFR mutations included R776H  and V769 M  in exon 20, and V834 L  and V843I [45, 46] in exon 21. Nine index patients (of 29, 31.0%) had inherited TP53 mutations, among whom two had another concurrent germline mutation, respectively (Case No. 38 and Case No. 40) (Table 2).
Ten (of 29, 34.5%) families had multiple lung cancers diagnosed or multiple lung nodules found in the probands or among their family members, which made in total over 78 tumours across the dataset. Specifically, six families (of 14, 42.9%) with multiple lung lesions harboured inherited EGFR mutations.
Among all the 78 tumours, fifty-four (~ 69.2%) of these tumours carried a subsequent positive somatic mutation. In the subgroup of inherited EGFR mutations, a secondary activating mutation occurred in 70.2% (33/47) of the germline EGFR mutation carrier lung cancer cases; similarly, in lung cancers diagnosed in germline T790 M mutation carriers, the proportion of a secondary activating mutation was 73% . Both of the concurrence rates above were higher than that reported in the sporadic NSCLCs (10%~ 35%) . About a half of them were EGFR L858R mutation; 48.1% (26/54) in all the curated inherited lung cancers and 57.6% (19/33) in the inherited EGFR subgroup (Table 3).
Based on our study, a significant association between family history of malignancy and EGFR mutation in lung cancer has been observed in Asians, patients diagnosed as ADCs/NSCLCs or those with lung cancer-affected (first-degree) relatives. Individuals with family history of lung cancer among first-degree relatives have a high risk of lung cancer, bearing an OR ranging 1.51–1.63 after adjustment of other potential confounders [7, 8]; Asians have the highest risk compared to the White and Black/African Americans (adjusted OR: 2.38, 1.46 and 1.67, respectively) . Besides, somatic EGFR mutations occur more frequently in Asians, ADCs, females and never-smokers [20,21,22], a preferential subpopulation partly overlapping with that in our findings.
Family history is a substitute for inherited susceptibility. Recent studies have revealed some germline loci significantly contributing to the likelihood of EGFR mutation in lung cancer, e.g. 3q28 (rs7636839, TP63), 5p15.33 (re2736100 and rs2853677, TERT), 6p21 (rs2495239, FOXP4; rs3817963, BTNL2; rs2179920, HLA-DPB1), 6q22.2 (rs9387478, ROS1/DCBLD1) and 17q24.3 (rs7216064, BPTF) in Asians [62,63,64]. These findings suggest underlying genetic modifiers responsible for a predisposition to somatic EGFR mutation in lung cancer. Thus, it will be interesting to investigate the potential role of CPGs in the pathogenesis of somatic EGFR mutation in lung cancer.
We summarized the potential CPGs and mutated sites reported in familial lung cancers where somatic EGFR mutation status was available. Almost all the publications reported the predisposition genes by case-studying one or several lung cancer-clustering families. Some lung cancers complicated or fell within the spectrum of clinical manifestations of familial cancer syndromes. Though limited, the curated data may help to shed light on genetic mechanisms in modifying somatic alterations.
About a half of the families in our curated dataset have reported germline EGFR mutation among family members, mostly T790 M and in the White families. Germline EGFR mutations are very rare, less than 1/7500 (0.01%) in the general population ; the proportion is higher in sporadic lung cancers, namely 1/555 (0.18%) of lung ADCs from TCGA (mostly White)  and 14/12,833 (0.11%) of Chinese lung cancers . In two small datasets of familial cases lately, none of the patients has been detected as positive [67, 68].
As the most reported germline mutation, T790 M accounted for 1.0% (5/503) in EGFR-mutated lung cancers from the US. Comparably, the proportion of germline T790 M mutation was much lower in Asians, i.e. 0/627 in Japanese NSCLCs  and 1/12,833 in Chinese lung cancers , notwithstanding their substantially higher somatic EGFR mutation rate in the tumours. Therefore, there is inherited susceptibility difference across ethnicities, which may explain the potentially preferential distribution of cancer predisposition genes in our curated families.
Most of the cases with inherited EGFR mutation in our investigation had concurrent activating mutations in their tumours. Generally, the germline EGFR mutations reported could be oncogenic if alone [42,43,44, 46, 69]; and the growth potential would be enhanced dramatically when co-occurring with a secondary activating mutation [42,43,44, 46, 69], which may indicate a ‘second-hit’ proliferative advantage in the tumours [42, 70]. Second somatic activating mutations non-randomly occurred in cis to the inherited mutations [36, 43, 46, 47]. Specifically, EGFR T790 M, the mutation responsible for over 50% of the acquired resistance post-TKI in EGFR-mutated lung cancers , emerges in cis with the initial drug-sensitizing EGFR mutation in the tumour as well . T790 M has a modest oncogenic effect, which may be the explanation that it is tolerated in humans as a germline mutation . In a cis configuration with the activating mutation, T790 M mutation could dramatically enhance EGFR catalytic activity, and thus, achieve a significant gain of function in transformation and tumour aggressiveness [36, 71, 72]. The increased proliferative advantage of the dual mutations has been observed in experimental conditions  as well as in clinical practice . The evidence concerning the mechanisms of the mutual interactions between concurrent double mutations is limited. Presumably, the germline mutation carrier may more likely predispose to lung cancer or develop in a more aggressive nature following the subsequent second somatic mutation; and of note, it is not rare that these carriers have multiple apparently independent lung cancers or lung nodules, the later possibly associated with precancerous or pre-invasive lesions .
The distribution of secondary somatic mutations was not typically concordant across family members or multiple lung cancers in the same patient, similar to a previously reported small familial cohort . However, there are some exceptions in our study. Familial cases with germline mutation V769 M had the somatic mutation at codon 719 . Specifically, energy balance could be an explanation for the phenomenon: V769 M alone or with secondary mutations (except L858R) cost less energy to keep EGFR in the activated configuration than in the inactivated state, thus causing activation of EGFR . For this reason, V769 M is more likely to combine with other mutations than L858R , which might be indirectly evidenced by the case reports from the COSMIC database where no concurrent V769 M and L858R mutations have been recorded yet . The other three families, germline R776H with a somatic mutation at codon 719 , and germline V834 L  and V843I  with somatic L858R among different family members, also caught our attention. However, in the records from COSMIC, no exclusive relations between these double mutations have been observed in the R776H, V834I or V843 L-mutated cases (but note that the origin of these mutations in COSMIC – somatic or germline - are mostly unknown and the sample size was small) . Thus, coincidence could not be excluded here. Whether some other precise mechanisms are associated with the preferential combinations in dual/multiplex mutations, like energy balance, and how they function, have yet to be clarified.
Most of the remaining families had germline CPGs functioning in response to DNA damage or regulating DNA repair pathways, including BRCA2 , CHEK2 , TP53 [52,53,54,55,56,57,58,59] and PMS2 . Carriers of these CPGs are vulnerable to familial cancers or inherited cancer syndromes, which could overlap with lung cancers, i.e. BRCA2 in hereditary breast/ovarian cancer , APC in familial adenomatous polyposis  and TP53 in Li-Fraumeni Syndrome [52,53,54,55,56,57,58,59]. Somatic EGFR mutations in these lung cancers are tentatively deletions or insertions (Table 2). Remarkably, these cases are affected with multiple-site lesions. In a recent analysis of germline sequencing data of 555 lung adenocarcinomas from TCGA, the authors found about 2.5% of the lung cases carried the germline mutations that could be linked to inherited risk . Most of them are in DNA repair pathways, including ATM (7, 1.3%), TP53 (4, 0.7%) and BRCA2 (1, 0.18%) , which are closely associated with familial cancer syndromes. What’s more, individuals carrying these predisposing genes or cancer syndromes would have an increased risk of lung cancer [76,77,78].
Somatic driver mutations, including EGFR mutations, occur early in lung cancer evolution, and these early-occurring mutations tend to be histological-subtype-specific . Generally, squamous-cell lung cancer harbours remarkably more clonal mutations (relating to early driver mutations) than lung adenocarcinoma due to differences in smoking behaviours. In never-smoker NSCLC females, somatic EGFR mutations are associated with increased exposure to environmental tobacco smoke . Both active and passive smoking are exogenous insults and could result in genotoxic damage which can be enhanced when the endogenous DNA repair system is compromised. Thus, there may be a genetically definable subset of lung cancer patients harbouring germline mutations involved in the dysfunction of DNA repair system, where genomic instability may be a potential risk modifier for EGFR mutation in lung tumour.
BRCA1/2, the genes responsible for double-strand break repairing, had a significantly lower expression due to its promoter hypermethylation in lung adenocarcinoma , potentially mediating genetic instability in lung tumorigenesis. Women with breast cancer have an increased risk of synchronous lung cancer (Hazard Ratio: 5.86 in ages 40–69) and vice versa . Members in the hereditary branch of families of patients eligible for BRCA test are at high risk of lung cancer, with an odds ratio of 4.5 compared to those belonging to the non-hereditary branch . Twelve families in our curated dataset reported family or personal history of breast or ovarian cancer, five of which had germline BRCA1/2 detected, and three probands had positive BRCA2 germline mutations. All the three index cases were ADCs yet with somatic EGFR mutated in different codons. Some small subsets investigated the association between germline BRCA1/2 mutation and EGFR-mutant lung cancer, but didn’t have positive findings due to the rare frequency of the BRCA1/2 germline mutations .
Nine index patients with germline TP53 mutation in our dataset complexed with Li-Fraumeni Syndrome, which is associated with multiple, often rare, cancers. The nine index families presented early onset of cancer at multiple sites across the families, which was typically consistent with the clinical features of Li-Fraumeni Syndrome. The median age of the index patients was 34 years old at the diagnosis of lung cancer (range 22–57), and females (7/9) and never-smokers (7/9) predominated. One case had concurrent somatic EGFR activating mutation and HER2 point mutation . Usually, these two driver mutations occur mutually exclusively ; but in this case may result from defective DNA repair due to TP53 mutation.
Somatically, HER2/ERBB2 is mutated in 2–4% of all NSCLCS, of which 80%~ 100% are insertions in exon 20 . Germline mutations in HER2 are also extremely rare: only one in 12,833 Chinese lung cancer patients has been identified by targeted next-generation sequencing. Yamamoto et al. reported the germline mutation HER2 G660D in the index family along with a germline HER2 V659 M mutation detected in a sporadic lung ADC . Mutations on the transmembrane domain could favour kinase activation and ERBB2 dimerization thus stimulating the MEK/ERK signalling . Both G660D and V659E are located at the transmembrane domain. Their mutant proteins are more stable than the wild-type and possess an oncogenic potential by activating Akt and p38, thus facilitating cell growth and survival . MET and EGFR are mutual complements, which activate the PI3K-AKT pathway by interacting with ERBB3; therefore, the inactivation of MET by its heterozygous germline mutation could complementarily enhance the EGFR-ERBB3-PI3K axis . The oncogenic stress may explain the pathogenesis of EGFR mutation in lung cancer .
Despite the evidence presented, we should bear in mind is that cases available for the current study (both the meta-analysis and the following dataset curation) are very limited. Caution is warranted in the data interpretation. Moreover, lung cancer is multifactorial and the genetics basis is complex. Current research on cancer predisposing genes is usually based on assumptions, which would over-extrapolate the data . Many susceptibility genes may only explain a small portion of the inherited susceptibility; but these genes with small or moderate effects might, in combination, act additively or synergistically to result in lung cancer susceptibility. The acquisition of specific somatic mutations in a background of predisposing genes may drive cancer evolution in a particular direction. Which genes behave this way and how the genetic aberrations function during lung cancer evolution are still undetermined.
Regarding the current study, other drawbacks besides data limitation include: 1) recall bias and selective reporting bias due to retrospective study designs; 2) mostly Asian patients, which are possibly not representative of other ethnicities; 3) heterogeneity in detection methods ; 4) intra-tumour heterogeneity (one single diagnostic assessment may not represent the whole picture) ; 5) differences in definitions regarding EGFR positive mutation (however, we presume the conclusion would not be significantly changed, since L858R and 19del are the most frequently mutated in lung cancer and other mutations reported in the studies we pooled here are limited); 6) heterogeneity in study populations (subgroup analysis in the current meta-analysis may help); 7) bias resulting from self-reported family history (However, this may not be a major issue, since there is a high positive predictive value and sensitivity in it by a recent systematic review ).
Given current evidence and our observations, there are potentially different genetic modifiers in somatically EGFR-mutant lung cancers from their wild-type counterparts. Familial lung cancers tentatively favour adenocarcinoma, females, never-smokers, coexistence with secondary somatic EGFR mutation and occasionally multi-focal lesions. Among them, germline EGFR mutation carriers affected with lung cancers are more frequently the White ethnicity. Some mechanisms such as energy balance may attribute to the specific secondary EGFR mutation type in the tumour of familial cases. However, caution needs to be taken when interpreting the data, as it is incomplete. Further studies on this topic should be encouraged, which will hopefully provide a more detailed genetic landscape for lung cancer aetiology.
Availability of data and materials
All data generated or analysed during this study are included in this published article and its supplemental information files.
Cancer predisposition gene
Epidermal growth factor receptor
Family history of all cancers
Family history of any cancer
Family history of other cancer except lung cancer
Family history of lung cancer
Non-small cell lung cancer
Tyrosine kinase inhibitor
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YIC is funded by China Scholarship Council (CSC201706240094) and West China-Liverpool Clinician-Scientist Leadership Scholarship. MPAD is funded by the Roy Castle Lung Cancer Foundation. This work is also partly supported by the 1.3.5 Project for Disciplines of Excellence, West China Hospital, Sichuan University (ZYJC18001), the National Key Development Plan for Precision Medicine Research (2017YFC0910004) and the Transformation Projects of Sci-Tech Achievements of Sichuan Province (2016CZYD0001). The funding bodies had no influences on the design of the study and collection, analysis, and interpretation of data and in writing the manuscript.
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Searching strategies for the meta-analysis. Table S2. Searching strategies for the second literature review. Table S3. Evaluation of case-control study quality with The Newcastle-Ottawa Scale (NOS) in meta-analyses. Table S4. Evaluation of cohort study quality with The Newcastle-Ottawa Scale (NOS) in meta-analyses. Figure S1. Forest plot of family history of any cancer and the risk of EGFR positive mutation (11 studies included). Figure S2. Funnel plot of family history of cancer and the risk of somatic EGFR positive mutation in lung cancer.
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Cheng, Y.I., Gan, Y.C., Liu, D. et al. Potential genetic modifiers for somatic EGFR mutation in lung cancer: a meta-analysis and literature review. BMC Cancer 19, 1068 (2019). https://doi.org/10.1186/s12885-019-6317-6
- Lung cancer
- EGFR mutation
- Family history of cancer
- Inherited susceptibility
- Cancer predisposition genes
- EGFR T790 M
- DNA repair
- Lung cancer aetiology