Weitz J, Koch M, Debus J, Hohler T, Galle PR, Buchler MW: Colorectal cancer. Lancet. 2005, 365: 153-165. 10.1016/S0140-6736(05)17706-X.
Article
PubMed
Google Scholar
Jemel A, Seigel R, Ward E, Murray T, Xu J, Thun MJ: Cancer statistics 2007. CA Cancer J Clin. 2007, 57: 43-46. 10.3322/canjclin.57.1.43.
Article
Google Scholar
Hind R, Rew DR, Johnson CD: Surgical excision alone is adequate for treatment for primary colorectal cancer. Annals of the Royal College of Surgeons of England. 1992, 74: 63-67.
CAS
PubMed
PubMed Central
Google Scholar
Andre T, Boni C, Mounedji-Boudiaf J, Navarro M, Tabernero J, Topham C, Zaninelli M, Clingan P, Bridgewater J, Tabah-Fisch I, Gramont A: Oxaliplatin, fluorouracil and leucovorin as adjuvant treatment for colon cancer. New England Journal of Medicine. 2004, 350: 2343-2351. 10.1056/NEJMoa032709.
Article
CAS
PubMed
Google Scholar
Goldberg RM, Rothenberg ML, Can Cutsem E, Benson AB, Blanke CD, Diasio RB, Grothey A, Ramanathan RK, Wickham R, Armstrong D, Viele C: The continuum of care: a paradigm for the management of metastatic colorectal cancer. Oncologist. 2007, 12: 38-50. 10.1634/theoncologist.12-1-38.
Article
PubMed
Google Scholar
Doillard JY, Bennouna J: Adjuvant chemotherapy for colon cancer: a confusing arena!. Annals of Oncology. 2005, 16: 1853-1854. 10.1093/annonc/mdi413.
Article
Google Scholar
Compton CC, Greene FL: The staging of colorectal cancer: 2004 and beyond. CA Cancer J Clin. 2004, 54: 295-308. 10.3322/canjclin.54.6.295.
Article
PubMed
Google Scholar
Walther A, Johnstone E, Swanton C, Midgley R, Tomlinson I, Kerr D: Genetic prognostic and predictive markers in colorectal cancer. Nat Rev Cancer. 2009, 7: 489-499. 10.1038/nrc2645.
Article
Google Scholar
Duffy MJ, Van Dalen A, Haglund C, Hansson L, Holinski-Feder E, Klapdor R, Peltomaki P, Sturgeon C, Topolcan O: Tumour markers in colorectal cancer: European Group on Tumour Markers (EGTM) guidelines for clinical use. Eur J Cancer. 2007, 43: 1348-1360. 10.1016/j.ejca.2007.03.021.
Article
CAS
PubMed
Google Scholar
Shankaran V, Wisinski KB, Mulcahy MF, Benson AB: The role of molecular markers in predicting response to therapy in patients with colorectal cancer. Mol Diag Ther. 2008, 12: 87-98.
Article
CAS
Google Scholar
Philips J, Wang R, Marwah S, Silver M, Tzardi M, Silver J, Ogino S, Hooshmand S, Kwak E, Freed E, Meyerhardt JA, Saridaki Z, Georgoulias V, Finkelstein D, Fuchs CS, Kulke MH, Shivdasani RA: Common mutations linked to adverse colorectal cancer outcomes. Br J Cancer. 2009, 101: 465-472. 10.1038/sj.bjc.6605164.
Article
PubMed
PubMed Central
Google Scholar
Sartore-Bianchi A, Di Nicolantonio F, Nichelatti M, Molinari F, De Dosso S, Saletti P, Martini M, Cipani T, Marrapese G, Mazzucchelli L, Lamba S, Veronese S, Frattini M, Bardelli A, Siena S: Multi-determinants analysis of molecular alterations for predicting clinical benefit to EGFR-targeted monoclonal antibodies in colorectal cancer. PLoS One. 2009, 4: e7287-10.1371/journal.pone.0007287.
Article
PubMed
PubMed Central
Google Scholar
Nannini M, Pantaleo MA, Maleddu A, Astolfi A, Formica S, Biasco G: Gene expression profling in colorectal cancer using microarray technologies: Results and perspectives. Cancer Treatment Reviews. 2009, 35: 201-209. 10.1016/j.ctrv.2008.10.006.
Article
CAS
PubMed
Google Scholar
Leung SY, Sohn JJ, Zanetti KA, Bowman ED, Yanaihara N, Yuen ST, Chan TL, Kwong DLW, Au GKH, Liu CG, Calin GA, Croce CM, Harris CC: MicroRNA expression profiles associated with prognosis and therapeutic outcome in colon adenocarcinoma. JAMA. 2008, 299: 425-436. 10.1001/jama.299.4.425.
PubMed
PubMed Central
Google Scholar
Derijks-Engwegen JYMN, Cats A, Smits ME, Schellens JHM, Neijnen JH: Improving colorectal cancer management: the potential of proteomics. Biomarkers in Medicine. 2008, 2: 253-289. 10.2217/17520363.2.3.253.
Article
CAS
PubMed
Google Scholar
Kuramitsu Y, Nakamura K: Proteomic analysis of cancer tissues: shedding light on carcinogenesis and possible biomarkers. Proteomics. 2006, 6: 5650-5661. 10.1002/pmic.200600218.
Article
CAS
PubMed
Google Scholar
Palmblad M, Tiss A, Cramer R: Mass spectrometry in clinical proteomics - from the present to the future. Proteomics Clin Appl. 2009, 3: 6-17. 10.1002/prca.200800090.
Article
CAS
PubMed
Google Scholar
Au JSK, Cho WCS, Yip T-T, Law SCK: Proteomic approach to biomarker discovery in cancer tissue from lung adenocarcinoma among non-smoking Chinese women in Hong Kong. Cancer Invest. 2008, 26: 128-135. 10.1080/07357900701788031.
Article
CAS
PubMed
Google Scholar
Sanders ME, Dias EC, Xu BJ, Mobley JA, Billheimer D, Roder H, Grigorieva J, Dowset M, Arteaga CL, Caprioli RM: Differentiating proteomic biomarkers in breast cancer by laser capture microdissection and MALDI MS. J Proteome Research. 2008, 7: 1500-1507. 10.1021/pr7008109.
Article
CAS
Google Scholar
Roesch-Ely M, Nees M, Karsai S, Ruess A, Bogumil R, Warnken U, Schnolzer M, Dietz A, Plinkert PK, Hofele C, Bosch FX: Proteomic analysis reveals successive aberrations in protein expression from healthy mucosa to invasive head and neck cancer. Oncogene. 2007, 26: 54-64. 10.1038/sj.onc.1209770.
Article
CAS
PubMed
Google Scholar
Melle C, Ernst G, Schimmel B, Bleul A, Mothes H, Kaufmann R, Settmacher U, Von Eggeling F: Different expression of calgizzarin (S100A11) in normal colonic epithelium, adenoma and colorectal carcinoma. Int J Oncol. 2006, 28: 195-200.
CAS
PubMed
Google Scholar
Polley ACJ, Mulholland F, Pin C, Williams EA, Bradburn DM, Mills SJ, Mathers JC, Johnson IT: Proteomic analysis reveals field-wide changes in protein expression in the morphologically normal mucosa of patients with colorectal cancer. Cancer Res. 2006, 66: 6553-6562. 10.1158/0008-5472.CAN-06-0534.
Article
CAS
PubMed
Google Scholar
Xiang F, Beavis RC: Growing protein-doped sinapic acid crystals for laser desorption: an alternative preparation method for difficult samples. Organic Mass Spectrom. 1993, 28: 1424-1429. 10.1002/oms.1210281211.
Article
CAS
Google Scholar
Wong JWH, Cagney G, Cartwright HM: SpecAlign - processing and alignment of mass spectra datasets. Bioinformatics. 2005, 21: 2088-2090. 10.1093/bioinformatics/bti300.
Article
CAS
PubMed
Google Scholar
Wong JWH, Durante C, Cartwright HM: Application of fast Fourier Transform Cross-Correlation for the alignment of large chromatographic and spectral datasets. Anal Chem. 2005, 77: 5655-5661. 10.1021/ac050619p.
Article
CAS
PubMed
Google Scholar
Whistler T, Rollin D, Vernon SD: A method for improving SELDI-TOF mass spectrometry data quality. Proteome Science. 2007, 5: 14-10.1186/1477-5956-5-14.
Article
PubMed
PubMed Central
Google Scholar
Reich M, Liefeld T, Gould J, Lerner J, Tamayo P, Mesirov JP: GenePattern 2.0. Nat Genet. 2006, 38: 500-501. 10.1038/ng0506-500.
Article
CAS
PubMed
Google Scholar
Gould J, Getz G, Monti S, Reich M, Mesirov JP: Comparative gene marker selection suite. Bioinformatics. 2006, 22: 1924-1925. 10.1093/bioinformatics/btl196.
Article
CAS
PubMed
Google Scholar
Golub TR, Slonim DK, Tamayo P, Huard C, Gaasenbeek M, Mesirov JP, Coller H, Loh ML, Downing JR, Calgiuri MA, Bloomfield CD, Lander ES: Molecular classification of Science: class discovery and class prediction by gene expression profiling. Science. 1999, 286: 531-537. 10.1126/science.286.5439.531.
Article
CAS
PubMed
Google Scholar
Benjamini Y, Hochberg Y: Controlling the false discovery rate: a practical and powerful approach to multiple testing. Journal of the Royal Statistical Society: Series B (Methodological). 1995, 57: 289-300.
Google Scholar
Belshaw NJ, Elliot GO, Foxall RJ, Dainty JR, Pal N, Coupe A, Garg D, Bradburn DM, Mathers JC, Johnson IT: Profiling CpG island field methylation in both morphologically normal and neoplastic human colonic mucosa. Br J Cancer. 2008, 99: 136-142. 10.1038/sj.bjc.6604432.
Article
CAS
PubMed
PubMed Central
Google Scholar
Barrier A, Boelle P-Y, Lemoine A, Tse C, Brault D, Chiappini F, Lacaine F, Houry S, Huguier M, Flahault A, Dudoit S: Gene expression profiling of nonneoplastic mucosa may predict clinical outcome of colon cancer patients. Dis Colon Rectum. 2005, 48: 2238-2248. 10.1007/s10350-005-0175-9.
Article
PubMed
Google Scholar
Hoshida Y, Villanueva A, Kobayashi M, Peix J, Chiang DY, Camargo A, Gupta S, Moore J, Wrobel MJ, Lerner J, Reich M, Chan JA, Glickman JN, Ikeda K, Hashimoto M, Watanabe G, Daidone MG, et al: Gene expression in fixed tissues and outcome in hepatocellular carcinoma. New Eng J Med. 2008, 359: 1995-2004. 10.1056/NEJMoa0804525.
Article
CAS
PubMed
PubMed Central
Google Scholar