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Table 1 62 shared DGEs in GSE61853、GSE140101、GSE107490

From: Sequential gene expression analysis of myelodysplastic syndrome transformation identifies HOXB3 and HOXB7 as the novel targets for mesenchymal cells in disease

Gene Symbol

Log2FC

P-value

Gene Set

ALDH1B1

2.21959644

2.36E-05

GSE140101

 

0.863379065

0.344701164

GSE107490

 

1.41306868

2.28E-03

GSE61853

ANKRD1

4.275054878

3.67E-05

GSE140101

 

4.64720788

0.029697897

GSE107490

B3GALT2

4.640003443

0.025740299

GSE140101

 

1.778463016

0.04390112

GSE107490

BDNF

2.751651406

2.63E-05

GSE140101

 

1.58090477

0.003192248

GSE107490

C15orf54

7.079804298

0.00041988

GSE140101

 

2.459431618

0.022730368

GSE107490

C8orf34

4.604160965

0.00035933

GSE140101

 

2.510961919

0.020938048

GSE107490

CAMK2N1

-5.714347351

0.00211602

GSE140101

 

-1.867105729

0.245696484

GSE107490

 

-1.24800022

9.96E-03

GSE61853

CD9

-3.232786976

0.00013667

GSE140101

 

-1.73470962

0.410107417

GSE107490

 

1.04047878

9.19E-03

GSE61853

CDH6

4.863804133

0.005834862

GSE140101

 

1.62250771

0.109191604

GSE107490

 

1.36463978

4.02E-03

GSE61853

DNAJB4

2.546720106

4.22E-06

GSE140101

 

1.109473261

0.034613621

GSE107490

DYNC1I1

2.876588418

0.001333049

GSE140101

 

2.146208933

0.00020978

GSE107490

EAPP

-1.040370231

0.041181242

GSE107490

 

1.11049122

6.00E-03

GSE61853

EGF

3.116701167

0.000348036

GSE140101

 

2.259941208

0.030368795

GSE107490

ENC1

5.027114058

0

GSE140101

 

2.046657231

0.045898614

GSE107490

EPGN

9.828095173

7.58E-06

GSE140101

 

4.236634344

0.039756196

GSE107490

ERCC6

2.654053664

0.000253386

GSE140101

 

1.275862646

0.005634787

GSE107490

FAM198B

2.123823258

0.00706219

GSE140101

 

1.18243362

1.40E-03

GSE61853

FAM212B

3.456298789

4.92E-05

GSE140101

 

1.50250034

0.046021972

GSE107490

FZD7

1.253385455

0.049964129

GSE107490

 

1.00383188

5.28E-03

GSE61853

GADD45A

2.005328331

0.000937253

GSE140101

 

0.99970494

0.0162257

GSE107490

GPR88

-8.422226184

0.003730458

GSE140101

 

-3.714245517

0.029006806

GSE107490

GRIK2

7.905879415

2.88E-05

GSE140101

 

3.011227255

0.025362395

GSE107490

HGD

13.58892984

2.72E-05

GSE140101

 

2.452858965

0.006307949

GSE107490

HOXB3

5.236159051

0.016893139

GSE140101

 

1.579025476

0.010187243

GSE107490

HOXB6

8.105207982

0.000483471

GSE140101

 

4.932214752

0.002929186

GSE107490

HOXB7

7.759393231

0.003021712

GSE140101

 

3.853829352

1.61E-05

GSE107490

INTU

2.583050627

0.001305576

GSE140101

 

1.151648631

0.012732716

GSE107490

ITIH3

15.50133211

0.001053709

GSE140101

 

2.042310805

0.046335147

GSE107490

KCNJ15

-2.13961095

0.043310163

GSE140101

 

-1.430569355

0.04089291

GSE107490

KCNK6

2.372837201

0.000899832

GSE140101

 

1.282018493

0.016508652

GSE107490

KRT18

6.898239866

0.039784339

GSE140101

 

2.014370575

0.029440096

GSE107490

LIF

3.791257105

1.19E-07

GSE140101

 

2.037364823

0.025122453

GSE107490

LIME1

2.364949856

0.00866422

GSE140101

 

-1.36085712

1.69E-03

GSE61853

LRP2

5.996437844

0.040237403

GSE140101

 

2.04439412

0.046088593

GSE107490

MAPK8IP3

2.377091945

1.59E-06

GSE140101

 

-1.55323374

2.65E-03

GSE61853

MCAM

4.58613714

8.22E-06

GSE140101

 

2.23147175

0.048866356

GSE107490

MT1M

-4.629553487

0.000288173

GSE140101

 

-2.110806786

0.00162601

GSE107490

NCKAP5

2.28353833

0.047374356

GSE140101

 

1.711999999

0.01646364

GSE107490

NEDD9

2.077137188

0.027244062

GSE140101

 

1.01537145

1.19E-03

GSE61853

NRXN3

4.087492066

0.034205593

GSE140101

 

5.140588996

0.012456264

GSE107490

P4HA2

1.378157612

0.016172506

GSE107490

 

1.00517785

7.08E-03

GSE61853

PDE11A

7.087082917

3.06E-05

GSE140101

 

2.670760374

0.04506532

GSE107490

PIDD1

2.422051168

0.000613631

GSE140101

 

-1.25465901

3.36E-04

GSE61853

PITX2

12.26269235

2.26E-06

GSE140101

 

1.624332995

0.036100387

GSE107490

PLOD2

2.236686901

0.000899832

GSE140101

 

1.34334538

0.03777175

GSE107490

PSG5

5.656918278

3.25E-11

GSE140101

 

2.812986404

0.014281341

GSE107490

 

1.83988636

1.06E-03

GSE61853

PSG9

3.733354341

0.00482393

GSE107490

 

1.04989238

3.88E-06

GSE61853

RIMS1

2.293992579

0.012139472

GSE140101

 

2.016059851

0.029145619

GSE107490

RPL7

-1.212806431

0.027409272

GSE107490

 

1.43503758

1.02E-04

GSE61853

SALL2

-2.381052934

0.020669261

GSE140101

 

-1.371240858

0.004520103

GSE107490

SERPINE1

2.613100547

0.01296588

GSE140101

 

2.690383234

0.00941362

GSE107490

SH3D21

4.489910142

0.000247259

GSE140101

 

1.189154473

0.044128777

GSE107490

SHOX2

-7.192959424

0.000375349

GSE140101

 

-4.109489148

0.035336319

GSE107490

SLC5A3

-3.530470591

0.00510518

GSE140101

 

-1.54904469

0.047566341

GSE107490

 

-1.56751485

4.39E-03

GSE61853

SLFNL1

3.751206659

0.003042524

GSE140101

 

2.453839771

0.027687351

GSE107490

SYT7

-3.648470882

0.023096348

GSE140101

 

-2.551726171

0.021606244

GSE107490

TBX15

-2.079643894

0.000212731

GSE140101

 

-1.939126001

0.001648641

GSE107490

TFAP2A

11.59783353

0.004329744

GSE140101

 

3.701448243

0.046375614

GSE107490

TMEM119

-2.141554705

0.016963893

GSE140101

 

-2.065941723

0.018775964

GSE107490

WASH3P

2.639155175

0.005297574

GSE140101

 

-1.19195718

2.44E-03

GSE61853

ZNF692

2.184216641

0.00041791

GSE140101

 

-1.10851553

8.13E-04

GSE61853