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Table 4 Methylation percentages between the normal and benign control subgroups in the six CpG sites

From: PCDH17 gene promoter methylation status in a cohort of Egyptian women with epithelial ovarian cancer

CpG site

Normal control

Benign control

P

CpG 1

  

0.574

 Median (IQR)

3 (2-4)

1.5 (0-5.5)

CpG 2

  

0.728

 Median (IQR)

2 (0-3)

2.5 (0-8)

CpG 3

  

0.81

 Median (IQR)

6 (2-12)

10 (0-23)

CpG 4

  

0.137

 Median (IQR)

3 (0-9)

8 (3-14.5)

CpG 5

  

0.437

 Median (IQR)

3 (0-6)

4 (1-13.5)

CpG 6

  

0.11

 Median (IQR)

3 (0-5)

6 (1.5-16.5)

Average CpG

  

0.65

 Median (IQR)

4.83 (2.83-6.67)

5.42 (2.67-12.67)

  1. p p value, IQR interquartile range
  2. *P value is statistically significant at p ≤ 0.05