Fig. 4

The concurrent alteration analysis of Cohort II. A The concurrent alterations detected by the HRD evaluation pipeline were shown by the oncoprint plot. Mutational types and sample features are shown in the legend. The top frequently detected alterations are included here. B The proportions of NCOR1 copy number loss, PTK2 amplification, and TP53 mutation are shown by the bar plot where HRD-positive and negative patients are colored differently. The frequency comparison was done in all patients in Cohort II and BRCA-intact subgroup. The p-values are shown as well