Skip to main content

Table 1 The detailed information of the top 40 survival-related AS events

From: Genome-wide profiling of alternative splicing in glioblastoma and their clinical value

AS_id symbol splice_type exons from_exon to_exon novel_splice pct_with_values psi_range std_psi AveExp z HR HR.95 L HR.95H FDR value
78,181 SYNE1 AT 152 null null 0 1 0.5308 0.0544 0.962424 −4.13214 9.94E-05 1.26E-06 0.00787 3.59E-05
76,352 TMEM63B AP 1 null null 0 0.7812 0.6292 0.1019 0.133696 4.04969 77.79737 9.457538 639.9583 5.13E-05
60,221 USP25 ES 20 18 21 0 0.9937 0.225 0.0486 0.072053 −3.82103 0.000223 3.00E-06 0.016666 0.000133
36,699 CDH11 ES 3 2 4 0 1 0.089 0.0169 0.983761 3.816861 1.35E+ 12 797,692.5 2.29E+ 18 0.000135
46,873 HSD11B1L ES 7 5.3 8 0 0.9875 0.6355 0.1149 0.608853 3.660695 39.97543 5.548568 288.0086 0.000252
36,205 FBXL19 AD 8.2 8.1 9 0 0.9688 0.619 0.0982 0.654726 −3.66063 0.021033 0.00266 0.166284 0.000252
9424 KLHL12 ES 12 11 13 0 1 0.0769 0.0148 0.979878 −3.56496 2.92E-12 1.33E-18 6.41E-06 0.000364
11,318 CSGALNACT2 AT 9 null null 0 1 0.0611 0.0159 0.986637 3.492296 1.03E+ 11 67,805.11 1.55E+ 17 0.000479
78,886 HDAC9 AP 6 null null 0 0.8062 1 0.1979 0.186725 3.459482 6.480635 2.248003 18.68264 0.000541
55,964 HAT1 ES 3 2 4 0 1 0.0952 0.0188 0.964809 −3.4369 4.44E-09 7.66E-14 0.000257 0.000588
7584 PSMD4 AD 7.2 7.1 8 0 1 0.0726 0.0137 0.066947 3.328474 8.82E+ 12 210,129.5 3.70E+ 20 0.000873
74,575 CREBRF AT 10 null null 0 1 0.0708 0.0157 0.984887 −3.31526 4.56E-13 2.31E-20 9.02E-06 0.000916
76,557 DST AT 108 null null 0 1 0.1764 0.0191 0.985881 −3.31112 7.37E-11 7.40E-17 7.33E-05 0.000929
11,956 CCAR1 ES 14 13 15 0 1 0.1978 0.0386 0.960246 3.293613 61,263.4 86.78252 43,248,395 0.000989
16,057 MS4A6A RI 9.2 9.1 9.3 0 1 0.2982 0.0523 0.339979 −3.27408 0.000744 9.98E-06 0.055515 0.00106
254 MORN1 AT 13 null null 0 0.975 0.6845 0.1516 0.235858 3.262628 8.502577 2.350391 30.75821 0.001104
30,765 ZNF280D AP 1 null null 0 1 0.2587 0.0575 0.869744 3.248248 382.5969 10.57641 13,840.28 0.001161
33,022 CHTF18 AD 10.2 10.1 11 0 0.825 0.352 0.0772 0.091989 −3.24069 0.00656 0.000314 0.13716 0.001192
30,767 ZNF280D AP 7 null null 0 1 0.2587 0.0576 0.130101 −3.23772 0.002682 7.44E-05 0.096637 0.001205
68,031 IGF2BP2 ES 11 10 12 0 0.75 0.7263 0.1301 0.637773 3.218231 18.38794 3.121825 108.3073 0.00129
22,747 METTL1 ES 4 3 5 0 1 0.1235 0.0248 0.966295 −3.19472 1.84E-06 5.59E-10 0.006076 0.0014
87,718 CIZ1 ES 6 5 7 0 1 0.1176 0.0222 0.976913 −3.18931 2.03E-06 6.46E-10 0.006397 0.001426
19,257 SLC37A2 ES 12 11 13 0 0.9062 0.2732 0.0556 0.95946 −3.18231 0.002262 5.31E-05 0.096342 0.001461
69,370 HOPX RI 4.4:4.5 4.3 4.6 0 0.9688 0.6206 0.13 0.645821 3.166331 9.407206 2.349021 37.67336 0.001544
40,976 NKIRAS2 AP 2.1 null null 0 1 0.2118 0.0306 0.925296 −3.16626 1.86E-07 1.27E-11 0.00273 0.001544
40,977 NKIRAS2 AP 1 null null 0 1 0.2118 0.0306 0.074703 3.166256 5,366,709 366.3605 7.86E+ 10 0.001544
2784 POMGNT1 RI 22.2 22.1 22.3 0 1 0.08 0.0128 0.983825 −3.15208 3.57E-10 4.77E-16 0.000267 0.001621
69,147 GUF1 ES 9 8 10 1 0.9187 0.431 0.0969 0.742379 −3.13883 0.036717 0.004664 0.289067 0.001696
71,959 PAIP1 AP 2.1 null null 0 1 0.4933 0.0642 0.947089 −3.12525 0.00011 3.63E-07 0.033446 0.001777
124,660 FYN ES 11 10 12 1 0.8188 0.7221 0.1231 0.204459 −3.09154 0.027465 0.002812 0.268262 0.001991
11,323 HNRNPF AP 1 null null 0 1 0.3749 0.0566 0.109251 −3.0628 0.001469 2.26E-05 0.095475 0.002193
36,979 LRRC29 AP 1 null null 0 0.975 0.9018 0.1998 0.490236 −3.05767 0.179869 0.059894 0.540167 0.002231
69,344 AASDH ES 12 11.1 13 0 0.9937 0.4611 0.0827 0.860699 3.023399 47.21881 3.880115 574.6262 0.0025
26,991 NFATC4 RI 12.3 12.2 12.4 0 1 0.7778 0.1157 0.749698 −3.00971 0.063154 0.010452 0.38159 0.002615
88,691 ACOT9 AT 13.2 null null 0 1 0.1981 0.0369 0.057825 −3.00722 0.000126 3.60E-07 0.0438 0.002636
88,692 ACOT9 AT 19 null null 0 1 0.1981 0.0369 0.942175 3.007223 7961.978 22.83085 2,776,643 0.002636
64,534 CSPG5 AD 4.2 4.1 5 0 1 0.4724 0.0775 0.134438 −3.0036 0.003635 9.30E-05 0.14202 0.002668
34,421 LYRM1 ES 7 2.2 8.1 0 0.9937 0.4063 0.0723 0.844673 −2.99931 0.008166 0.000353 0.188998 0.002706
100,544 PCBP4 ES 4.1 3 5 1 0.9 0.6469 0.1241 0.469185 2.996804 11.61581 2.33608 57.7579 0.002728
48,957 GPI AP 2.1 null null 0 1 0.1481 0.0255 0.955976 2.990991 2,377,718 157.7364 3.58E+ 10 0.002781