Integrative analysis of breast cancer profiles in TCGA by TNBC subgrouping reveals novel microRNA-specific clusters, including miR-17-92a, distinguishing basal-like 1 and basal-like 2 TNBC subtypes

Table 2 mRNA functional analysis

Down-regulated in BL1 vs BL2	Up-regulated in BL1 vs BL2
Extracellular matrix organization and adhesion	mRNA processing
EGF domains	cell division
Collagen processing and catabolism	nuclear export
Transmembrane components	mitochondria
TSP domains	DNA repair
Cadherin domains	viral processing
Cell junctions
Leucine-rich repeats
Fibronectin domains
Sushi domains

Most distinct functional areas of mRNAs differentially expressed between BL1 and BL2 subtypes

ISSN: 1471-2407