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Table 1 Primer sequences and annealing temperatures for real-time reverse-transcription PCR (RT2-PCR)

From: The predominant expression of cancer stem cell marker ALDH1A3 in tumor infiltrative area is associated with shorter overall survival of human glioblastoma

Primer name

Sequence

Annealing temperature (°C)

Nestin

 

62

 for.

CTCCAAGAATGGAGGCTGTAGGAA

 

 rev.

CCTATGAGATGGAGCAGGCAAGA

 

CD133

 

60

 for.

CAGAAGGCATATGAATCC

 

 rev.

CACCACATTTGTTACAGC

 

CD44

 

60

 for.

CCCAGATGGAGAAAGCTCTG

 

 rev.

ACTTGGCTTTCTGTCCTCCA

 

YKL40

 

63

 for.

GACCACAGGCCATCACAGTCC

 

 rev.

TGTACCCCACAGCATAGTCAGTGTT

 

ALDH1A3

 

60

 for.

TCTCGACAAAGCCCTGAAGT

 

 rev.

TATTCGGCCAAAGCGTATTC

 

OLIG2

 

60

 for.

CTCCTCAAATCGCATCCAGA

 

 rev.

AGAAAAAGGTCATCGGGCTC

 

SOX2

 

64

 for.

ACCGGCGGCAACCAGAAGAACAG

 

 rev.

GCGCCGCGGCCGGTATTTAT

 
  1. for. forward, rev. reverse