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Table 3 Detail information of the RIPK1 gene polymorphisms

From: RIPK1 polymorphisms alter the susceptibility to cervical Cancer among the Uyghur population in China

SNPChromosomeBPAllelesGroupGenotypeAlleleMAFHWE pHaploReg
rs690794363,078,032A/C CCCAAACA  Enhancer histone marks, Motifs changed, Selected eQTL hits
   Control13 (2.62%)129 (25.96%)355 (71.42%)155 (15.59%)839 (84.41%)0.1560.734
   Case15 (4.40%)77 (22.58%)249 (73.02%)107 (15.69%)575 (84.31%)0.157 
rs207768163,085,866A/G CCCTTTCT  Motifs changed, Selected eQTL hits
   Control9 (1.82%)140 (28.28%)346 (69.90%)158 (15.96%)832 (84.04%)0.1600.313
   Case19 (5.57%)89 (26.10%)233 (68.33%)127 (18.62%)555 (81.38%)0.186 
rs950340063,108,673A/G AAAGGGAG  Enhancer histone marks, Motifs changed
   Control1 (0.20%)47 (9.44%)450 (90.36%)49 (4.92%)947 (95.08%)0.0511.000
   Case3 (0.88%)39 (11.40%)300 (87.72%)45 (6.58%)639 (93.42%)0.066 
rs1754862963,114,223C/T TTTCCCTC  Motifs changed
   Control9 (1.81%)122 (24.50%)367 (73.69%)140 (14.06%)856 (85.94%)0.1410.855
   Case10 (2.92%)72 (21.05%)260 (76.03%)92 (13.45%)592 (86.55%)0.134 
  1. SNP Sing nucleotide polymorphism, MAF Minor allele frequency, HWE Hardy weinberg equilibrium