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Table 1 A list of 20 up- and 20 down-regulated genes in CD133+ gastric cancer celllines compared to CD133- celllines

From: Impact of in vitro driven expression signatures of CD133 stem cell marker and tumor stroma on clinical outcomes in gastric cancers

Type Symbol SNR RefSeq Description
Up CDC2 2.91 NM_001786.2 Cell division cycle 2, G1 to S and G2 to M
SGOL1 2.38 NM_138484.2 Shugoshin-like 1 (S. pombe)
TCHP 2.13 NM_032300.2 Trichoplein, keratin filament binding
TOP2A 2.13 NM_001067.2 Topoisomerase (DNA) II alpha 170 kDa
CENPK 1.85 NM_022145.3 Centromere protein K
PAQR3 1.85 NM_001040202.1 Progestin and adipoQ receptor family member III
HMMR 1.81 NM_012485.1 Hyaluronan-mediated motility receptor (RHAMM)
LIN54 1.76 NM_194282.1 Lin-54 homolog (C. elegans)
DCK 1.75 NM_000788.1 Deoxycytidine kinase
ALG8 1.72 NM_024079.4 Asparagine-linked glycosylation 8, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)
SEPSECS 1.68 NM_016955.1 Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase
LOC642341 1.65 XM_930714.1 Hypothetical LOC642341
BUB3 1.65 NM_004725.2 BUB3 budding uninhibited by benzimidazoles 3 homolog (yeast)
KNTC1 1.56 NM_014708.3 Kinetochore associated 1
MGC40489 1.55 XR_016048.1 Hypothetical protein MGC40489
LOC100132861 1.54 XM_001716443.1 Hypothetical protein LOC100132861
RFC5 1.53 NM_007370.3 Replication factor C (activator 1) 5, 36.5 kDa
CR1L 1.50 NM_175710.1 Complement component (3b/4b) receptor 1-like
PPT1 1.49 NM_000310.2 Palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile)
ACTL6A 1.49 NM_177989.2 Actin-like 6A
Down ARG1 −1.76 NM_000045.2 Arginase, liver
CPXM2 −1.59 NM_198148.1 Carboxypeptidase X (M14 family), member 2
LOC440353 −1.58 NR_002603.1 Nuclear pore complex interacting protein pseudogene
ALPK1 −1.56 NM_025144.2 Alpha-kinase 1
KIAA0664 −1.51 NM_015229.3 KIAA0664
MIR634 −1.51 NR_030364.1 MicroRNA 634
LOC642446 −1.47 XM_001717781.1 Similar to hCG1795201
FBXO7 −1.47 NM_012179.3 F-box protein 7
LOC645812 −1.45 XM_928801.1 Similar to wingless-type MMTV integration site family, member 9B precursor
POLR2C −1.44 NM_032940.2 Polymerase (RNA) II (DNA directed) polypeptide C, 33 kDa
LOC441124 −1.44 XM_499022.3 Hypothetical LOC441124
FGL1 −1.44 NM_004467.3 Fibrinogen-like 1
TMEM120A −1.44 NM_031925.1 Transmembrane protein 120A
LOC650909 −1.43 XM_939995.2 Similar to activating signal cointegrator 1 complex subunit 3-like 1
LOC100129101 −1.41 XM_001721125.1 PHypothetical LOC100129101
LOC728944 −1.41 XM_001128859.1 Similar to THAP domain-containing protein 4
PARP12 −1.40 NM_022750.2 Poly (ADP-ribose) polymerase family, member 12
SND1 −1.40 NM_014390.2 Staphylococcal nuclease and tudor domain containing 1
CAMK2B −1.40 NM_172081.1 Calcium/calmodulin-dependent protein kinase (CaM kinase) II beta
LOC100132761 −1.40 XM_001716956.1 Hypothetical protein LOC100132761
  1. Note: Gene symbols are shown with RefSeq annotations. Type indicates whether the gene is relatively up- or down-regulated in CD133+ celllines compared to CD133- celllines. SNR (signal-to-noise ratios) is the level of relative expression