Table 1 Number of patients in the OncomiR Cancer Database (OMCD), by cancer type
Cancer Type (TCGA Code) | Total number of samples | Tumor | Normal |
|---|---|---|---|
Breast invasive carcinoma [BRCA] | 869 | 782 | 87 |
Brain Lower Grade Glioma [LGG] | 530 | 530 | 0 |
Thyroid carcinoma [THCA] | 573 | 514 | 59 |
Prostate adenocarcinoma [PRAD] | 551 | 499 | 52 |
Ovarian serous cystadenocarcinoma [OV] | 495 | 495 | 0 |
Head and Neck squamous cell carcinoma [HNSC] | 532 | 488 | 44 |
Lung adenocarcinoma [LUAD] | 504 | 458 | 46 |
Skin Cutaneous Melanoma [SKCM] | 453 | 451 | 2 |
Uterine Carcinosarcoma [UCS] | 450 | 418 | 32 |
Bladder Urothelial Carcinoma [BLCA] | 436 | 417 | 19 |
Stomach adenocarcinoma [STAD] | 450 | 404 | 46 |
Liver hepatocellular carcinoma [LIHC] | 426 | 375 | 51 |
Lung squamous cell carcinoma [LUSC] | 388 | 343 | 45 |
Cervical squamous cell carcinoma and endocervical adenocarcinoma [CESC] | 313 | 310 | 3 |
Kidney renal papillary cell carcinoma [KIRP] | 326 | 292 | 34 |
Colon adenocarcinoma [COAD] | 280 | 272 | 8 |
Sarcoma [SARC] | 263 | 263 | 0 |
Kidney renal clear cell carcinoma [KIRC] | 332 | 261 | 71 |
Esophageal carcinoma [ESCA] | 200 | 187 | 13 |
Pheochromocytoma and Paraganglioma [PCPG] | 187 | 184 | 3 |
Pancreatic adenocarcinoma [PAAD] | 183 | 179 | 4 |
Testicular Germ Cell Tumors [TGCT] | 156 | 156 | 0 |
Thymoma [THYM] | 126 | 124 | 2 |
Rectum adenocarcinoma [READ] | 97 | 94 | 3 |
Mesothelioma [MESO] | 87 | 87 | 0 |
Uveal Melanoma [UVM] | 80 | 80 | 0 |
Adrenocortical carcinoma [ACC] | 79 | 79 | 0 |
Kidney Chromophobe [KICH] | 91 | 66 | 25 |
Uterine Corpus Endometrial Carcinoma [UCEC] | 57 | 57 | 0 |
Diffuse Large B-cell Lymphoma [DLBC] | 47 | 47 | 0 |
FFPE Pilot Phase II [FPPP] | 45 | 45 | 0 |
Cholangiocarcinoma [CHOL] | 45 | 36 | 9 |
Glioblastoma multiforme [GBM] | 5 | 0 | 5 |
Total | 9656 | 8993 | 663 |