Skip to main content

Table 1 After expansion by Pearson, the 41 genes correlated with the rest 211 genes and involved in 32 pathways

From: Putative cancer stem cells may be the key target to inhibit cancer cell repopulation between the intervals of chemoradiation in murine mesothelioma

Number Pathway ID Pathway FDRa
1 GO:0008299 Isoprenoid biosynthetic process 0.002134
2 GO:0051346 Negative regulation of hydrolase activity 0.002385
3 GO:0006644 Phospholipid metabolic process 0.003211
4 GO:0006916 Anti-apoptosis 0.00327
5 GO:0043086 Negative regulation of catalytic activity 0.003652
6 GO:0042976 Activation of Janus kinase activity 0.004027
7 GO:0018106 Peptidyl-histidine phosphorylation 0.004027
8 GO:0006417 Regulation of translation 0.006019
9 GO:0031399 Regulation of protein modification process 0.006455
10 GO:0010608 Posttranscriptional regulation of gene expression 0.006471
11 GO:0031124 mRNA 3'-end processing 0.006525
12 GO:0040008 Regulation of growth 0.007398
13 GO:0008202 Steroid metabolic process 0.007429
14 GO:0008361 Regulation of cell size 0.007517
15 GO:0045793 Positive regulation of cell size 0.007545
16 GO:0045927 Positive regulation of growth 0.007662
17 GO:0006066 Alcohol metabolic process 0.007722
18 GO:0001932 Regulation of protein phosphorylation 0.00775
19 GO:0043154 Negative regulation of caspase activity 0.007818
20 GO:0016049 Cell growth 0.007857
21 GO:0043066 Negative regulation of apoptosis 0.007891
22 GO:0008610 Lipid biosynthetic process 0.007913
23 GO:0030307 Positive regulation of cell growth 0.008
24 GO:0007259 JAK-STAT cascade 0.008302
25 GO:0060548 Negative regulation of cell death 0.009413
26 GO:0001558 Regulation of cell growth 0.00978
27 GO:0043069 Negative regulation of programmed cell death 0.009786
28 GO:0051336 Regulation of hydrolase activity 0.009791
29 GO:0016126 Sterol biosynthetic process 0.01
30 GO:0008203 Cholesterol metabolic process 0.01
31 GO:0006695 Cholesterol biosynthetic process 0.01
32 GO:0016125 Sterol metabolic process 0.01
  1. At cutoffs of 0.98<r<-0.98 and p<0.00001, 221 genes were identified to be significantly correlated with one of the 41 genes. aFDR False discovery rate. FDR<0.01