Identification of novel enriched recurrent chimeric COL7A1-UCN2 in human laryngeal cancer samples using deep sequencing

Table 3 RNA sequencing data for three pairs of LC and ANMMT samples for transcriptomic analysis

Sample		Clean reads	Expressed genes	Expressed Transcripts		Chimeric Transcripts		Alternative splicing	SNP
ID	Tissue	Clean reads	Expressed genes	Number	Novel- Transcripts	Number	COL7A1-UCN2 TIC	Number	SNP
1	Tumor a	51,217,028	17,083	24,932	665	55	+	110,548	112,177
1	Normal b	51,478,578	17,010	24,521	624	33	–	85,635	112,710
2	Tumor c	51,098,090	17,278	25,427	789	42	–	108,219	120,160
2	Normal d	51,157,672	16,901	24,108	540	34	–	85,393	100,871
3	Tumor e	50,846,034	18,089	26,379	1194	32	+	105,866	134,840
3	Normal f	51,363,004	17,590	25,339	1005	26	–	103,312	164,495

ISSN: 1471-2407