Skip to main content

Table 1 Sources of gene expression and protein abundance data

From: Expitope 2.0: a tool to assess immunotherapeutic antigens for their potential cross-reactivity against naturally expressed proteins in human tissues

Data source

ID

Name

Number of tissues

Type

References

PaxDB

Pax4

PaxDB v4.0

22

Protein abundance

[24]

Expression Atlas

E-Prot-3

Human Protein Atlas

44

Protein abundance

[25, 26]

Expression Atlas

E-Prot-1

Human Proteome Map

23

Protein abundance

[25, 27]

Expression Atlas

E-Mtab-513

Illumina Body Map

16

Gene expression

[10, 25]

Expression Atlas

E-Mtab-5214

GTEx

53

Gene expression

[25, 28]

Wang et al. 2008

Wang

Wang 2008

7

Gene expression

[9]

Expression Atlas

E-Mtab-3358

FANTOM5 RIKEN

56

Gene expression

[25, 29]