Genomic location | Sig. CpGs more methylated in tumor | Sig. CpGs less methylated in tumor | Fisher’s exact p-value |
---|---|---|---|
A. Island versus non-island | |||
 CG Island | 93,536 | 35,639 | 3.44E-154 |
 Non-CG Island | 58,787 | 38,273 |  |
B. Regulatory region versus gene body (All significant CpGs) | |||
 Regulatory Region | 55,029 | 23,056 | 0.49 |
 Gene Body | 46,502 | 19,858 |  |
C. Regulatory Region Versus Gene Body (Top 10,000 most significant CpGs) | |||
 Regulatory Region | 3165 | 776 | 1.50E-02 |
 Gene Body | 1902 | 700 |  |