SNP
|
Gene
|
Chromosome
|
Chromosome Positiona
|
Distance from gene start
|
Gene position
|
Function
|
MAFb
|
---|
rs1800682
|
FAS
|
10
|
90749963
|
325c
|
5′ upstream
|
regulatory
|
C (0.403)
|
rs2290907
|
TNRC6Cd
|
17
|
76093677
|
93483e
|
Intron 18–19
|
No-coding
|
G (0.115)
|
rs16970849
|
TMC8
|
17
|
76133908
|
8403f
|
Intron 11–12
|
No-coding
|
A (0.049)
|
- aChromosome positions of each SNP based on dbSNP human build 138 and human genome build 37.5
- bMAF: minor allele frequency based on HapMap data in CEU population
- cDistance from FAS gene start (90750288)-forward strand
- dTNRC6C: trinucleotide repeat containing 6C gene (4 kb distance from TMC6)
- eDistance from TNRC6Cgene start (76000194)-forward strand (15.3 kb distant from TMC6 gene start)
- fDistance fromTMC8 gene start (76125505)-forward strand