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Table 3 BRCA1/2 mutation frequencies in patients with TNBC and non-TNBC, by age-at-diagnosis, family phenotype and ethnicity

From: High prevalence and predominance of BRCA1 germline mutations in Pakistani triple-negative breast cancer patients

Variables

TNBC (N = 192)

Non-TNBC (N = 331)

P a

No. of cases

No. of mutations (%) in

Non-

No. of cases

No. of mutations (%) in

Non-

BRCA1

BRCA2

BRCA1/2

carriers

BRCA1

BRCA2

BRCA1/2

carriers

Family phenotype

 1 early-onset BC (≤ 30 years)

90

13 (14.4)

0 (0)

13 (14.4)

77

147

8 (5.4)

6 (4.1)

14 (9.5)

133

0.03

 Familial BC

76

37 (48.7)

2 (2.6)

39 (51.3)

37

159

19 (12.0)

11 (6.9)

30 (18.9)

129

< 0.0001

 Familial BC and OCb

26

21 (80.8)

0 (0)

21 (80.8)

5

25

7 (28.0)

1 (4.0)

8 (32.0)

17

0.0005

Age at diagnosis of familial BC/OC (years)

  ≤ 30

41

24 (58.5)

2 (4.9)

26 (63.4)

15

25

11 (44.0)

0 (0)

11 (44.0)

14

NS

 31–40

32

22 (68.8)

0 (0)

22 (68.8)

10

59

9 (15.2)

6 (10.2)

15 (25.4)

44

< 0.0001

 41–50

20

11 (55.0)

0 (0)

11 (55.0)

9

71

5 (7.0)

3 (4.2)

8 (11.3)

63

< 0.0001

  > 50

9

1 (11.1)

0 (0)

1 (11.1)

8

29

1 (3.4)

3 (10.3)

4 (13.8)

25

NS

Early-onset BC (regardless of a family history of BC/OC)

  ≤ 30 years

131

37 (28.2)

2 (1.5)

39 (29.8)

92

172

19 (11.0)

6 (3.5)

25 (14.5)

147

0.0003

Ethnicity

 Punjabi

151

56 (37.1)

2 (1.3)

58 (38.4)

93

229

28 (12.2)

9 (3.9)

37 (16.2)

192

< 0.0001

 Pathan

19

6 (31.6)

0 (0)

6 (31.6)

13

54

3 (5.6)

4 (7.4)

7 (13.0)

47

0.01

 Othersc

20

8 (40.0)

0 (0)

8 (40.0)

12

48

3 (6.2)

5 (10.4)

8 (16.7)

40

0.003

 Unknown

2

1 (50.0)

0 (0)

1 (50)

1

0

0

0

0

0

 
  1. P values marked in bold are statistically significant
  2. BC breast cancer, NS non-significant, OC ovarian cancer, TNBC triple-negative breast cancer
  3. aFisher’s exact test; BRCA1 carriers vs. non-carriers. bOnly female index cases affected with BC were included. cOther: minor ethnic groups including Urdu speaking, Saraiki, Kashmiri, Balochi, Indian migratory, Sindhi, Gujrati, Persian speaking, mixed/multiracial