Table 1 Oligonucleotide probes for Northern blot analysis of rRNA fragments
Probe | Source | Complementary sequence used in probes | Position in human a28S or b18S rRNA |
|---|---|---|---|
28SCD1 | Houge et al. (1995) [12] | 5’-GAC TAA TAT GCT TAA ATT CAG CGG GTC GCC ACG TC-3’ | 16–50 |
28SVR2 | Nadano et al. (2000) [25] | 5’-ACG TGT TAG ACT CCT TGG TCC GTG-3’ | 1305–1328 |
28S1 | He et al. (2012) [30] | 5’-ACC CGG CGT TCG GTT CAT-3’ | 1867–1884 |
28S4 | He et al. (2012) [30] | 5’-GCG GGC CTT CGC GAT GCT TTG TT-3’ | 3617–3639 |
28S5 | He et al. (2012) [30] | 5’-ACC CAG AAG CAG GTC GTC TAC GAA TGG TTT AGC GCC AG-3’ | 4913–4950 |
18S1 | He et al. (2012) [30] | 5’-GCA CCA GAC TTG CCC TCC-3’ | 698–715 |
18S2 | He et al. (2012) [30] | 5’-GAA TAA CGC CGC CGC ATC-3’ | 1200–1217 |
18S3 | He et al. (2012) [30] | 5’-CGG ACA TCT AAG GGC ATC ACA G-3’ | 1594–1615 |