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Table 1 Positions and frequencies of SNPs within AGO2 gene

From: Argonaute 2 and nasopharyngeal carcinoma: a genetic association study and functional analysis

No. SNPsa Alleles (Minor/Major) Frequenciesb Positionsc Regions
1 rs4961280 C/A 0.111 −1809 Promoter
2 rs11996715 C/A 0.430 −1686 Promoter
3 rs4961226 G/T 0.400 3050 Intron 1
4 rs10088596 C/T 0.453 5311 Intron 1
5 rs883596 G/C 0.105 9957 Intron 1
6 rs13261055 A/G 0.386 16208 Intron 1
7 rs7001653 G/A 0.444 24567 Intron 1
8 rs7819727 A/G 0.452 48394 Intron 1
9 rs7009635 T/C 0.367 50724 Intron 2
10 rs7005286 C/T 0.337 51145 Intron 2
11 rs11776034 C/G 0.211 53712 Intron 2
12 rs3735805 C/T 0.356 68083 Intron 3
13 rs2977490 A/G 0.453 72247 Intron 3
14 rs2292773 C/T 0.278 73107 Intron 4
15 rs3928672 G/A 0.222 73438 Intron 4
16 rs2271735 G/T 0.178 76295 Intron 6
17 rs2977481 G/C 0.183 83748 Intron 10
18 rs2292779 G/C 0.244 84394 Intron 11
19 rs2944764 C/T 0.239 84576 Intron 11
20 rs11166983 G/A 0.278 87519 Intron 11
21 rs12542354 C/T 0.239 89462 Intron 13
22 rs13252337 A/G 0.186 96222 Intron 16
23 rs2977469 G/A 0.465 96314 Intron 16
24 rs2977464 C/T 0.333 100412 Intron 16
25 rs2977462 T/C 0.467 102467 Intron 16
  1. SNPs in bold were not in Hardy-Weinberg equilibrium (HWE) (rs883596 and rs2977490, both P < 0.05) or failed genotyping (rs2977481) in the Guangxi population
  2. adbSNP ID number
  3. bMinor allele frequencies in HapMap-HCB (HCB, unrelated Han Chinese in Beijing, China)
  4. cThe position of the SNPs is relative to the first nucleotide of the open reading frame of the AGO2 gene, referred to as accession number NT_008046.15