Skip to main content

Advertisement

Springer Nature is making SARS-CoV-2 and COVID-19 research free. View research | View latest news | Sign up for updates

Table 1 Primers used to detect HPV in clinical samples.

From: Sensitive HPV detection in oropharyngeal cancers

Primer Set Primer name 5'-3' sequence
GP5+/GP6+ GP5+ TTT GTT ACT GTG GTA GAT ACT AC
  GP6+ GAA AAA TAA ACT GTA AAT CAT ATT C
MY09/11 MY09 CGT CCM ARR GGA WAC TGA TC
  MY11 GCM CAG GGW CAT AAY AAT GG
PGMY09/11 PGMY11-A GCA CAG GGA CAT AAC AAT GG
  PGMY11-B GCG CAG GGC CAC AAT AAT GG
  PGMY11-C GCA CAG GGA CAT AAT AAT GG
  PGMY11-D GCC CAG GGC CAC AAC AAT GG
  PGMY11-E GCT CAG GGT TTA AAC AAT GG
  PGMY09-F CGT CCC AAA GGA AAC TGA TC
  PGMY09-G CGA CCT AAA GGA AAC TGA TC
  PGMY09-H CGT CCA AAA GGA AAC TGA TC
  PGMY09-I G CCA AGG GGA AAC TGA TC
  PGMY09-J CGT CCC AAA GGA TAC TGA TC
  PGMY09-K CGT CCA AGG GGA TAC TGA TC
  PGMY09-L CGA CCT AAA GGG AAT TGA TC
  PGMY09-M CGA CCT AGT GGA AAT TGA TC
  PGMY09-N CGA CCA AGG GGA TAT TGA TC
  PGMY09-P G CCC AAC GGA AAC TGA TC
  PGMY09-Q CGA CCC AAG GGA AAC TGG TC
  PGMY09-R CGT CCT AAA GGA AAC TGG TC
  HMB01 GCG ACC CAA TGC AAA TTG GT
  GH2O GAA GAG CCA AGG ACA GGT AC
  PCO4 CAA CTT CAT CCA CGT TCA CC
  1. Primer sets, names and sequences used for the detection of HPV in clinical samples. GP5+/GP6+ and MY09/11 PCRs consist of a single forward and reverse primers, whereas the PGMY09/11 set comprises 5 forward (11A-E) and 13 reverse (09F-HMB01) primers and includes GH2O and PCO4 β-actin internal controls.