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Table 2 Fishers Exact test to determine probability of overlap between differentially expressed miRNAs and differentially methylated regions in colon cancer and the regions of overlap

From: Human colon cancer profiles show differential microRNA expression depending on mismatch repair status and are characteristic of undifferentiated proliferative states

A     
   Regions with Δ miRNA transcript Genomic regions
Regions with Δ methylation 10 2707
Regions with no Δ methylation 18 72293
p-value 2.75e-8  
B     
Chromosome Location Object Distance (bp) Δ Methylation
X 133131074 miR-363   
X 133131505 miR-20b   
X 133135052 C-DMR 3547 0.45
X 133507562 C-DMR 462 0.39
X 133508024 miR-503   
X 133508504 C-DMR 480 0.42
1 98284214 miR-137   
1 98291025 C-DMR 6811 0.37
15 87712252 miR-9*   
15 87712252 miR-9   
15 87745140 C-DMR 32888 0.39
15 87749926 C-DMR   0.37
16 65755256 C-DMR 38469 0.47
16 65793725 miR-328   
2 176711496 C-DMR 11781 0.37
2 176723277 miR-10b   
2 219556012 C-DMR 18599 0.53
2 219574611 miR-375   
22 21495270 miR-650   
22 21526783 C-DMR 31513 -0.56
6 72169975 miR-30a-5p   
6 72169975 miR-30a-3p   
6 72185916 C-DMR 15941 0.38
6 72187453 C-DMR   
8 41637116 miR-486   
8 41676418 C-DMR 39302 -0.5
  1. Genomic regions are grouped by alternating bold font.
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