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Table 3 Functional GO categories

From: Identification of Achaete-scute complex-like 1 (ASCL1) target genes and evaluation of DKK1 and TPH1 expression in pancreatic endocrine tumours

Systems

Categorys

No. of genes or transcripts

Biological processes

  
 

Regulation of biological or cellular process

342

 

Development regulation/cellular

292

 

Cellular metabolic process

189

 

Transcription and regulation of transcription

144

 

Biological/cellular adhesion

68

 

Regulation of nucleo -base -side, -tide and nucleic acid metabolic process

62

 

Regulation of gene expression

56

 

Cell differentiation

44

 

Locomotion, cellular or regulation of

29

 

Cellular migration/localisation

26

 

Phosphorylation

20

 

Neurogenes

19

 

Protein amino acid phosphorylation

17

 

Carbohydrate biosynthetic process

5

 

Integrin-mediated signalling pathway

5

Molecular functions

  
 

Binding activity, receptor, DNA, nucleic acid

305

 

Transcription regulation/cofactor or binding activity

67

 

Kinase activity

54

 

Phosphotransferase activity

49

 

Ligase activity ubiquitin/amino acid/small conjugating protein

24

 

Ligase activity

20

 

Enzyme activator activity

13

 

Transmembrane receptor protein kinase activity

11

Cellular components

  
 

Cell junction

14

 

Intercellular junction

8

 

Basement membrane

5

  1. Functional categories are based on GO annotation. Note that in GO function hierarchy, some genes/transcripts belong to multiple categories.