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Table 1 The top regulated genes from the array for each comparison.

From: Identification of proteins involved in neural progenitor cell targeting of gliomas

Gene

Fold change N29 and N32 vs N25

Cryac

33.06

Prss1

8.41

Prrx1

6.08

Lgals3

5.04

Faf1

4.45

Kcnd2

0.34

Camk2n2

0.32

Tgfb1i4

0.31

Igfbp5

0.24

Fst

0.14

Gene

Fold change ST14a and Hib5 vs Rn33b

Fst

155.25

Cryac

62.76

Smgb

41.11

Prss1

35.74

Gas6

11.90

Hfb2

0.26

Dbi

0.19

Map17

0.15

Pitx2

0.12

Col18a1

0.06

Gene

Fold change glioma/NPC

Col3a1

7.13

Pga5

2.75

Nme1

1.94

Rasa1

1.84

Hfb2

1.81

Gas6

0.12

Mch

0.10

Mcl1

0.09

Smgb

0.07

Fst

0.04

  1. Microarray comparisons. Shown are the fold changes of the five most up- or downregulated genes for the following comparisons: N29 and N32 vs. N25, ST14A and Hib5 vs. RN33b, Glioma vs. NPCs. Statistical analysis was performed using the software SAM, which allows the detection of falsely positive genes (family-wise error rate) by averaging the amount of genes classified as significant over chosen permutations of data between the groups. The false discovery rate was set to false discovery rate ≤ 1 10-4.
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BMC Cancer

ISSN: 1471-2407

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