Skip to main content

Advertisement

Table 7 Manual and automated hybridization of FFPE tumors

From: Automated array-CGH optimized for archival formalin-fixed, paraffin-embedded tumor material

Sample Hyb method Variance StDev DR Correlation
FFPE tumor 3 manual 0.11 0.06 2.0 0.82
FFPE tumor 3 automated 0.10 0.04 1.9  
FFPE tumor 4 manual 0.10 0.05 1.4 0.72
FFPE tumor 4 automated 0.08 0.03 1.3  
FFPE tumor 5 manual 0.10 0.04 1.5 0.85
FFPE tumor 5 automated 0.08 0.02 1.3  
FFPE tumor 6 manual 0.13 0.06 1.9 0.84
FFPE tumor 6 automated 0.08 0.04 1.9  
  1. Variance (Variance), standard deviation (StDev), dynamic range (DR) and Pearson correlation (Correlation) of four FFPE tumors hybridized with our manual and our automated method (Hyb method).