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Table 2 Sequence for each primer used for StaRT-PCR virtually-multiplexed transcript abundance measurement or for internal standard preparation (CT) [15].

From: CEBPG transcription factor correlates with antioxidant and DNA repair genes in normal bronchial epithelial cells but not in individuals with bronchogenic carcinoma

Gene

Accession #

Primer

Sequence

Position

Product

ACTB

X00351

Forward

5' ATC CTC ACC CTG AAG TAC CC 3'

231

 
  

Reverse

5' CCA TCT CTT GCT CGA AGT CC 3'

704

493 bp

  

CT

5' CCA TCT CTT GCT CGA AGT CCG CCA GCC AGG TCC AGA CGC A 3'

568

377 bp

CAT

X04076

Forward

5' CCA GAA GAA AGC GGT CAA GA 3'

1492

 
  

Reverse

5' AAC CTT CAT TTT CCC CTG GG 3'

1822

350 bp

  

CT

5' AAC CTT CAT TTT CCC CTG GGC CAG TGA TGA GCG GGT TAC A 3'

1699

247 bp

CEBPB

NM_005194

Forward

5' TGT CCA AAC CAA CCG CAC AT 3'

1412

 
  

Reverse

5' AGC AAC AAG CCC GTA GGA AC 3'

1657

265 bp

  

CT

5' AGC AAC AAG CCC GTA GGA ACA CGC GTT CAG CCA TGT TTA A 3'

1571

199 bp

CEBPG

U20240

Forward

5' CGG TTG AAA AGC AAG CAG AAA GCA 3'

488

 
  

Reverse

5' GAT CCC AGA AAA TAG CCT CCA ATG 3'

814

350 bp

  

CT

5' GAT CCC AGA AAA TAG CCT CCA ATG AAC ATT CAA GCC ACA AGC TC 3'

726

282 bp

E2F1

M96577

Forward

5' TGA TAC CCC AAC TCC CTC TA 3'

2076

 
  

Reverse

5' AAA GCA GGA GGG AAC AGA GC 3'

2452

396 bp

  

CT

5' AAA GCA GGA GGG AAC AGA GCA CTG CAG GGA CCA CAG G 3'

2363

327 bp

E2F3

Y10479

Forward

5' TGA AAG CCC CTC CAG AAA CAA G 3'

1019

 
  

Reverse

5' GCA GCA GGG GAG GCA GTA AGT T 3'

1336

339 bp

  

CT

5' GCA GCA GGG GAG GCA GTA AGT TGG GGA GGC CAG AGG AGA AAG GT 3'

1253

278 bp

E2F6

AF059292

Forward

5' GGG CCT GCT GCC ATC AAA AAT A 3'

99

 
  

Reverse

5' CCG CTT TCG GAC TCC CAG TTT 3'

283

205 bp

  

CT

5' CCG CTT TCG GAC TCC CAG TTA GCG ATA CAT CAA AAC GAG G 3'

184

125 bp

ERCC1

M13194

Forward

5' CTG GAG CCC CGA GGA AGC 3'

739

 
  

Reverse

5' CAC TGG GGG TTT CCT TTG 3'

1049

328 bp

  

CT

5' CAC TGG GGG TTT CCT TGG AAG GCC AGA TCT TCT CTT 3

928

240 bp

ERCC2

X52221

Forward

5' GGC CTT CTT CAC CAG CTA C 3'

1608

 
  

Reverse

5' GTA GTC CGT CTT GCC CCT G 3'

2004

415 bp

  

CT

5' GTA GTC CGT CTT GCC CCT GTG GAA CTG GTC CCG CAG GT 3'

2597

346 bp

ERCC4

U64315

Forward

5' AGT GCA TCT CCA TGT CCC GCT ACT A 3'

2213

 
  

Reverse

5' CGA TGT TCT TAA CGT GGT GCA TCA A 3'

2578

390 bp

  

CT

5' CGA TGT TCT TAA CGT GGT GCA TCA ACA GGC TGT GGC TTG CTT TGT 3'

2433

265 bp

ERCC5

D16305

Forward

5' AAG GAA AGA GAA AGA AGC AGC AGC CA 3'

3087

 
  

Reverse

5' CAA ACA CAG ATC TGG CGG TCA CGA GG 3'

3501

440 bp

  

CT

5' CAA ACA CAG ATC TGG CGG TCA CGA GGA GCT TCC TTC ACT GAG TTC TGC GAA T 3'

3401

366 bp

EVI1

NM_005241

Forward

5' CGC CGG ATA TCC ACG AAG A 3'

302

 
  

Reverse

5' ATG CTG AGA GCG AAT GTG C 3'

711

428 bp

  

CT

5' ATG CTG AGA GCG AAT GTG CTT AAA TGC CTT GGG ACA CT 3'

587

323 bp

GPX1

Y00433

Forward

5' CCT GGT GGT GCT CGG CTT CC 3'

522

 
  

Reverse

5' CAA TGG TCT GGA AGC GGC GG 3'

852

350 bp

  

CT

5' CAA TGG TCT GGA AGC GGC GGA CCG GAG ACC AGG TGA TGA G 3'

757

279 bp

GPX3

D16360

Forward

5' GCA GAG CCG GGG ACA AGA GAA 3'

113

 
  

Reverse

5' CTG CTC TTT CTC TCC ATT GAC 3'

471

379 bp

  

CT

5' CTG CTC TTT CTC TCC ATT GAC GCT CTT CCT GTA GTG CAT TCA 3'

298

227 bp

GSTM1,2,4,5

J03817

Forward

5' GGG ACG CTC CTG ATT ATG AC 3'

122

 
  

Reverse

5' GCA AAC CAT GGC CGC TTC CC 3'

442

340 bp

  

CT

5' GCA AAC CAT GGC CGC TTC CCT TCT CCA AAA TGT CCA CAC G 3'

301

219 bp

GSTM3

J05459

Forward

5' GTG CGA GTC GTC TAT GGT TC 3'

23

 
  

Reverse

5' AGT TGT GTG CGG AAA TCC AT 3'

342

339 bp

  

CT

5' AGT TGT GTG CGG AAA TCC ATT GCT CTG GGT GAT CTT GTT C 3'

230

247 bp

GSTP1

X08058

Forward

5' TCC GCT GCA AAT ACA TCT CC 3'

305

 
  

Reverse

5' TGT TTC CCG TTG CCA TTG AT 3'

616

331 bp

  

CT

5' TGT TTC CCG TTG CCA TTG ATT AGG ACC TCA TGG ATC AGC A 3'

485

220 bp

GSTT1

X79389

Forward

5' GCT CTA CCT GGA CCT GCT GT 3'

12

 
  

Reverse

5' GGA ACA CAG GGA ACA TCA CC 3'

351

359 bp

  

CT

5' GGA ACA CAG GGA ACA TCA CCT AGA GCA GGA TGG CCA CAC T 3'

199

227 bp

GSTZ1

U86529

Forward

5' TCA CCC CCT ACC CTA CCA TCA GC 3'

806

 
  

Reverse

5' ATT TCA GCG CGG GCA TTC TTT 3'

1267

482 bp

  

CT

5' ATT TCA GCG CGG GCA TTC TTT CCG CAT TCT CAT CTC AGC CTC AC 3'

1161

399 bp

mGST1

J03746

Forward

5' GTC GGA GCA CGG ATC TAC CAC A 3'

404

 
  

Reverse

5' TTC CTC TGC TCC CCT CCT ACC TA 3'

623

242 bp

  

CT

5' TTC CTC TGC TCC CCT CCT ACC TAT TTT CAG CAA CCT GTA AGC C 3'

505

144 bp

SOD1

X02317

Forward

5' TGA AGG TGT GGG GAA GCA TTA 3'

153

 
  

Reverse

5' TTA CAC CAC AAG CCA AAC GAC 3'

492

360 bp

  

CT

5' TTA CAC CAC AAG CCA AAC GAC TGA TGC AAT GGT CTC CTG AGA 3'

384

273 bp

XPA

D14533

Forward

5' CTC GGC GAC GGC GGC TGC GGC TAC TGG AG 3'

178

 
  

Reverse

5' TGT CGG ACT TCC TTT GCT TCT TCT AAT GC 3'

629

480 bp

  

CT

5' TGT CGG ACT TCC TTT GCT TCT TCT AAT GCT CTT TTT TCT AAA TCA CAG TCT 3'

487

360 bp

XRCC1

M36089

Forward

5' CCC CTG AAG AGA CCA AAG CA 3'

1906

 
  

Reverse

5' CCA TTG AAG GCT GTG ACG TA 3'

2241

355 bp

  

CT

5' CCA TTG AAG GCT GTG ACG TAT CAG GGA CTG GCA GAT G 3'

2142

276 bp