Table 2 Prostate cancer: the key gene retained for classification of tissue types. This table contains the genes and their descriptions. The key genes are selected based on how correlated their average intensity to the normal and tumor tissues. The genes are placed in the order of descending correlation coefficient r. Ten key features were shown, the complete table can be downloaded at http://web.hku.hk/~daniely/microarray. Entire data for the experiment can be downloaded from http://www-genome.wi.mit.edu/MPR/Prostate.
From: Classification between normal and tumor tissues based on the pair-wise gene expression ratio
No. on array | Gene probe with correlation >0.4 to cancer tissue type | Info | Correlation |
|---|---|---|---|
6185 | 37639_at | Cluster Incl. X07732:Human hepatoma mRNA for serine protease hepsin | 0.7119 |
8965 | 37720_at | Cluster Incl. M22382:Human mitochondrial matrix protein P1 (nuclear encoded) mRNA, complete cds M93036 /FEATURE=mRNA /DEFINITION=HUMGA7A08 | 0.7018 |
12148 | 575_s_at | Human (clone 21726) carcinoma-associated antigen GA733-2 (GA733-2) mRNA | 0.6917 |
6462 | 38634_at | Cluster Incl. M11433:Human cellular retinol-binding protein mRNA | 0.6514 |
10138 | 41288_at | Cluster Incl. AL036744:DKFZp564I1663_r1 Homo sapiens cDNA | 0.6367 |
12153 | 556_s_at | M96233 /FEATURE=expanded_cds/DEFINITION=HUMGSTM4A Human glutathione transferase class mu number 4 (GSTM4) gene | 0.6217 |
6866 | 39756_g_at | Cluster Incl. Z93930:Human DNA sequence from clone 292E10 on chromosome 22q11-12. Contains the XBP1 gene for X-box binding protein 1 (TREB5), ESTs, STSs, GSSs and a putative CpG island | 0.6201 |
4365 | 41468_at | Cluster Incl. M30894:Human T-cell receptor Ti rearranged gamma-chain mRNA V-J-C region X14885 /FEATURE=mRNA /DEFINITION=HSTGF31 | 0.6193 |
10956 | 1767_s_at | H.sapiens gene for transforming growth factor-beta 3 (TGF- beta 3) | 0.6160 |
9172 | 38406_f_at | Cluster Incl. AI207842:ao89h09.x1 Homo sapiens cDNA, 3 end / | 0.6155 |