Table 6 Tags overexpressed in normal skin compared with KS. For comparison tag numbers for each group were normalized to 50,000 transcripts
From: Gene expression profile of AIDS-related Kaposi's sarcoma
No. | Tag | ID | KS | NS |
|---|---|---|---|---|
1 | AGAAAGATGT | Annexin A1 | 2 | 18 |
2 | AAGGCAATTT | Vascular Rab-GAP/TBC-containing/Homo sapiens cDNA FLJ11739 fis, clone HEMBA1005497 | 2 | 14 |
3 | GCTGCCCTGG | Centaurin, gamma 3/CDP-diacylglycerol – inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) | 2 | 14 |
4 | TGCGCCTTTA | No reliable matches | 2 | 13 |
5 | ACATTTCAAA | Keratin 1 | 11 | 77 |
6 | GCCCCTGCTG | Keratin 5 | 82 | 219 |
7 | GAAAACAAAG | Keratin 10 | 14 | 122 |
8 | GCAAAACTCC | Carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)/ Homo sapiens cDNA FLJ13686 fis, clone PLACE2000047 | 2 | 16 |
9 | AATAAATTCC | Neuroblastoma, suppression of tumorigenicity 1 | 3 | 25 |
10 | GGGAAACCCC | Dipeptidylpeptidase 9/ Homo sapiens cDNA: FLJ21289 fis, clone COL01938 | 4 | 33 |
11 | AGATGAGATG | Core promoter element binding protein | 3 | 24 |
12 | CCTCTGCACT | DnaJ protein SB73/ ESTs, Weakly similar to A46010 X-linked retinopathy protein (C-terminal, clone XEH.8c) | 3 | 24 |
13 | AAAGTCTAGA | Cyclin D1 | 2 | 15 |
14 | CAAAAAAAAA | Multiple (n = 26) | 2 | 15 |
15 | TCACCCAGGG | No reliable matches | 2 | 14 |
16 | GGCCCCTCAC | Insulin-like growth factor binding protein 6/ zinc finger protein 262 | 4 | 25 |
17 | AGAATCGCTT | Coatomer protein complex, subunit alpha/ expressed in activated T/LAK lymphocytes | 7 | 49 |
18 | ATTTGAGAAG | RAD23 homolog B (S. cerevisiae) | 7 | 49 |
19 | TCTAACAACG | No reliable matches* | 0 | 94 |
20 | AATTTGCAAA | Homo sapiens cDNA FLJ13582 fis, clone PLACE1009048 | 0 | 44 |
21 | TCTCCATACC | No reliable matches | 0 | 42 |
22 | CCCATCGCCT | No reliable matches | 0 | 33 |
23 | CCCATCGGCC | No reliable matches* | 0 | 18 |
24 | CCACGGGATT | Collagen, type III, alpha 1 (Ehlers-Danlos syndrome type IV, autosomal dominant) | 0 | 15 |
25 | GCTTTCTCAC | No reliable matches | 0 | 14 |
26 | TCACCGGCAG | Tag not found in any mRNA sequence, tag not seen in any public SAGE library* | 0 | 14 |
27 | ACCCCGGGAG | No reliable matches* | 0 | 11 |
28 | TTAAAAAAAA | Hypothetical protein PRO2521/ matrin 3 | 0 | 10 |