Table 2 Annotations of genes with prognostic value in the prediction of CRC metastasis
From: Concerted down-regulation of immune-system related genes predicts metastasis in colorectal carcinoma
Agilent probe name | Gene symbol | Gene name | RefSeq | GO immune1 |
|---|---|---|---|---|
A_23_P138635 | BNIP3 | BCL2/adenovirus E1B 19 kDa interacting protein 3 | NM_004052, NP_004043 | Yes |
A_23_P55270 | CCL18 | chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated) | NM_002988, NP_002979 | Yes |
A_23_P70095 | CD74 | CD74 molecule, major histocompatibility complex, class II invariant chain | NM_001025158, NM_001025159, NM_004355, NP_001020329, NP_001020330, NP_004346 | Yes |
A_24_P131589 | CD86 | CD86 molecule | NM_006889, NM_175862, NP_008820, NP_787058 | Yes |
A_24_P510357 | CKAP2 | cytoskeleton associated protein 2 | NM_001098525, NM_018204, NP_001091995, NP_060674 | |
A_23_P125278 | CXCL11 | chemokine (C-X-C motif) ligand 11 | NM_005409, NP_005400 | Yes |
A_23_P18452 | CXCL9 | chemokine (C-X-C motif) ligand 9 | NM_002416, NP_002407 | Yes |
A_23_P254944 | GSTT1 | glutathione S-transferase theta 1 | NM_000853, NP_000844 | |
A_23_P42306 | HLA-DMA | major histocompatibility complex, class II, DM alpha | NM_006120, NP_006111 | Yes |
A_23_P258769 | HLA-DPB1 | major histocompatibility complex, class II, DP beta 1 | NM_002121, NP_002112 | Yes |
A_24_P370472 | HLA-DRB4 | major histocompatibility complex, class II, DR beta 4 | NM_021983, NP_068818, XM_001723414, XM_001723417, XM_001723419, XP_001723466, XP_001723469, XP_001723471 | Yes |
A_23_P31006 | HLA-DRB5 | major histocompatibility complex, class II, DR beta 5 | NM_002125, NP_002116 | Yes |
A_23_P112026 | IDO1 | indoleamine 2,3-dioxygenase 1 | NM_002164, NP_002155 | Yes |
A_23_P119943 | IGFBP2 | insulin-like growth factor binding protein 2, 36 kDa | NM_000597, NP_000588 | |
A_23_P158817 | IGHG1 | immunoglobulin heavy locus | ||
A_24_P92683 | IGHA1 | immunoglobulin heavy constant alpha 1 | Yes | |
A_24_P204727 | IGHG1 | immunoglobulin heavy constant gamma 1 (G1m marker) | ||
A_24_P315941 | IGHG1 | immunoglobulin heavy constant gamma 1 (G1m marker) | ||
A_23_P21249 | IGHG1 | immunoglobulin heavy constant gamma 1 (G1m marker) | ||
A_24_P519504 | IGL@ | immunoglobulin lambda locus | ||
A_24_P83102 | IGLL1 | immunoglobulin lambda-like polypeptide 1 | NM_020070, NM_152855, NP_064455, NP_690594 | Yes |
A_23_P76249 | KRT6B | keratin 6B | NM_005555, NP_005546 | |
A_23_P1691 | MMP1 | matrix metallopeptidase 1 (interstitial collagenase) | NM_002421, NP_002412 | |
A_23_P169494 | ORM1 | orosomucoid 1 | NM_000607, NP_000598 | Yes |
A_23_P213508 | PCSK1 | proprotein convertase subtilisin/kexin type 1 | NM_000439, NP_000430 | |
A_24_P174793 | PCSK1 | proprotein convertase subtilisin/kexin type 1 | NM_000439, NP_000430 | |
A_23_P149517 | PIGR | polymeric immunoglobulin receptor | NM_002644, NP_002635 | |
A_24_P844984 | PIGR | polymeric immunoglobulin receptor | NM_002644, NP_002635 | |
A_23_P1962 | RARRES3 | retinoic acid receptor responder (tazarotene induced) 3 | NM_004585, NP_004576 | |
A_23_P81898 | UBD | ubiquitin D | NM_006398, NP_006389 |