Skip to main content

Table 1 Oligonucleotides used for real time PCR

From: Identification of TRPC6 as a possible candidate target gene within an amplicon at 11q21-q22.2 for migratory capacity in head and neck squamous cell carcinomas

Gene

Oligonucleotides

JRKL

Forward: 5CGCGATAGTCAGGGAGCTGT 3

Reverse: 5GGGTTGGCTGGCAAATAGAC 3

CNTN5

Forward: 5CACCCCATCTCGAATGATCC 3

Reverse: 5GGTGCTGTCTTCGGAACTGC 3

AD031

Forward: 5TCTCCTGTTGATTCGCAGATGT 3

Reverse: 5 TTGAGACCAGTTGATGAATACTCGA 3

PGR

Forward: 5AACTTCTTGATAACTTGCATGATCTTG 3

Reverse: 5AGCAGTACAGATGAAGTTGTTTGACA 3

TRPC6

Forward: 5TTCTCATGGATGGAGATGCTCA 3

Reverse: 5CCATATCATGCCTATTACCCAGGA3

YAP1

Forward: 5GACTTCCTGAACAGTGTGGATGAG 3

Reverse: 5TGCTTTGGTTGATAGTATCACCTGTAT 3

BIRC3

Forward: 5CATCCGTCAAGTTCAAGCCA 3

Reverse: 5GATAGCAGCTGTTCAAGTAGATGAGG 3

PORIMIN

Forward: 5TGCTTCATCAGTAACAATCACAACA 3

Reverse: 5CCTTTCTTTGCTTCAGAATGCAT 3

MMP7

Forward: 5CCAGGATGATATTAAAGGCATTCA 3

Reverse: 5TGAATTACTTCTCTTTCCATATAGTTTCTGA 3

MMP20

Forward: 5CTGCTCTTCAAGGACCGGATT 3

Reverse: 5TGTCCGCAAGTGAACCTGC 3

MMP27

Forward: 5GCATTTGGTGCTGGAGGTTT 3

Reverse: 5ACCCTTTGTCCATGGTTTGG 3

MMP8

Forward: 5AGTTGATGCAGTTTTCCAGCAA 3

Reverse: 5GGTCCACTGAAGACATGGAAGAA 3

MMP10

Forward: 5TGCATCAGGCACCAATTTATTC 3

Reverse: 5GAGTGGCCAAGTTCATGAGCA 3

MMP1

Forward: 5TGGACCAACAATTTCAGAGAGTACA 3

Reverse: 5TTCATGAGCTGCAACACGATG 3

MMP3

Forward: 5TCTTTGTAGAGGACAAATACTGGAGATT 3

Reverse: 5CCATGGAATTTCTCTTCTCATCAA 3

MMP12

Forward: 5CGATGAGGACGAATTCTGGAC 3

Reverse: 5CAGTGAGGAACAAGTGGTGCC 3

MMP13

Forward: 5GCCATTACCAGTCTCCGAGG 3

Reverse: 5GCAGGCGCCAGAAGAATCT 3

RNMT

Forward: 5GTTCCTGAATTCTTGGTCTATTTTCC 3

Reverse: 5CTTCTTTGCCATTTCATTTAGCAAT 3

MC5R

Forward: 5TTGGATCTCAACCTGAATGCC 3

Reverse: 5TTGACATTGGGTCCTGAAAGG 3

MC2R

Forward: 5CCTTCTCATTCATTTTGCCCA 3

Reverse: 5TCCCAATCACCTTCAGCTCG 3

ZNF443

Forward: 5GAACCTGGATTGTGTAGTAATGAAATG 3

Reverse: 5TGATCTTCAATGTTCTGGTCTTTCC 3

MAN2B1

Forward: 5GCTCAAAACCGTGGACCAGT 3

Reverse: 5GGCGTGCTGGATGTCATTCT 3

JUNB

Forward: 5AAACTCCTGAAACCGAGCCTG 3

Reverse: 5CGCTTTGAGACTCCGGTAGG 3

STCH

Forward: 5AACCCGAGCAATGTCTGGAA 3

Reverse: 5TGATTGAAGTCCTGTCCTCCAA 3

NRIP1

Forward: 5GGGATCAGGTACTGCCGTTG 3

Reverse: 5TCCTCTTCATTATGCCCAGCA 3

CYPA

Forward: 5CATCTGCACTGCCAGACTGA 3

Reverse: 5TTGCCAAACACCACATGCTT 3