Nominal p-values of enrichment scores † | ||||
---|---|---|---|---|
Pathways | n * | N vs SPL | N vs LPL | N vs CRC |
1) KEGG BASE EXCISION REPAIR | 48 | 0.042 | - | - |
2) KEGG HOMOLOGOUS RECOMBINATION | 34 | 0.043 | - | - |
3) REACTOME ACTIVATION OF THE PRE REPLICATIVE COMPLEX | 35 | 0.047 | - | - |
4) REACTOME HOMOLOGOUS RECOMBINATION REPAIR | 22 | - | 0.048 | - |
5) BIOCARTA CELLCYCLE PATHWAY | 32 | - | - | 0.025 |
6) BIOCARTA MONOCYTE PATHWAY | 20 | - | - | 0.035 |
7) BIOCARTA P27 PATHWAY | 14 | - | - | 0.025 |
8) BIOCARTA RB PATHWAY | 20 | - | - | 0.047 |
9) BIOCARTA SET PATHWAY | 15 | - | - | 0.034 |
10) BIOCARTA SKP2E2F PATHWAY | 12 | - | - | 0.014 |
11) KEGG RNA POLYMERASE | 27 | - | - | 0.04 |
12) REACTOME AMINO ACID TRANSPORT ACROSS THE PLASMA MEMBRANE | 40 | - | - | 0.027 |
13) REACTOME CYTOSOLIC TRNA AMINOACYLATION | 26 | - | - | 0.031 |
14) REACTOME G1 PHASE | 17 | - | - | 0.03 |
15) REACTOME GLUCOSE TRANSPORT | 55 | - | - | 0.041 |
16) REACTOME GLYCOLYSIS | 27 | - | - | 0.039 |
17) REACTOME NEP NS2 INTERACTS WITH THE CELLULAR EXPORT MACHINERY | 39 | - | - | 0.049 |
18) REACTOME POST CHAPERONIN TUBULIN FOLDING PATHWAY | 9 | - | - | 0.034 |
19) REACTOME PREFOLDIN MEDIATED TRANSFER OF SUBSTRATE TO CCT TRIC | 25 | - | - | 0.027 |
20) REACTOME PROSTANOID HORMONES | 15 | - | - | 0.046 |
21) REACTOME RNA POLYMERASE III CHAIN ELONGATION | 12 | - | - | 0.033 |
22) REACTOME RNA POLYMERASE III TRANSCRIPTION INITIATION FROM TYPE 2 PROMOTER | 21 | - | - | 0.047 |
23) REACTOME TAT MEDIATED HIV1 ELONGATION ARREST AND RECOVERY | 31 | - | - | 0.049 |
24) REACTOME TRNA AMINOACYLATION | 34 | - | - | 0.048 |
25) REACTOME TRANSPORT OF RIBONUCLEOPROTEINS INTO THE HOST NUCLEUS | 40 | - | - | 0.043 |
26) REACTOME VPR MEDIATED NUCLEAR IMPORT OF PICS | 48 | - | - | 0.031 |
27) SA REG CASCADE OF CYCLIN EXPR | 18 | - | - | 0.01 |
28) BIOCARTA ARF PATHWAY | 24 | 0.033 | 0.037 | - |
29) KEGG NUCLEOTIDE EXCISION REPAIR | 48 | 0.031 | 0.043 | - |
30) KEGG ONE CARBON POOL BY FOLATE | 19 | 0.004 | 0.032 | - |
31) REACTOME DUAL INCISION REACTION IN GG NER | 18 | 0.032 | 0.025 | - |
32) REACTOME G2 M TRANSITION | 80 | 0.038 | 0.035 | - |
33) REACTOME MITOCHONDRIAL TRNA AMINOACYLATION | 11 | 0.032 | 0.04 | - |
34) REACTOME PURINE METABOLISM | 42 | 0.037 | 0.03 | - |
35) REACTOME RNA POLYMERASE I CHAIN ELONGATION | 29 | 0.021 | 0.026 | - |
36) REACTOME RNA POLYMERASE I PROMOTER ESCAPE | 21 | 0.027 | 0.014 | - |
37) REACTOME RNA POLYMERASE I TRANSCRIPTION INITIATION | 25 | 0.013 | 0.009 | - |
38) REACTOME RNA POLYMERASE I TRANSCRIPTION TERMINATION | 22 | 0.027 | 0.013 | - |
39) REACTOME SNRNP ASSEMBLY | 60 | 0.031 | 0.029 | - |
40) REACTOME MRNA DECAY BY 3 TO 5 EXORIBONUCLEASE | 11 | 0.015 | - | 0.029 |
41) REACTOME RNA POLYMERASE III TRANSCRIPTION INITIATION | 29 | 0.041 | - | 0.047 |
42) REACTOME NUCLEAR IMPORT OF REV PROTEIN | 39 | - | 0.049 | 0.043 |
43) REACTOME REV MEDIATED NUCLEAR EXPORT OF HIV1 RNA | 41 | - | 0.043 | 0.039 |
44) BIOCARTA PTC1 PATHWAY | 13 | 0.022 | 0.018 | 0.028 |
45) BIOCARTA RANMS PATHWAY | 8 | 0.013 | 0.024 | 0.022 |
46) REACTOME CYCLIN A1 ASSOCIATED EVENTS DURING G2 M TRANSITION | 19 | 0.038 | 0.034 | 0.026 |
47) REACTOME FORMATION OF TUBULIN FOLDING INTERMEDIATES BY CCT TRIC | 18 | 0.044 | 0.039 | 0.011 |
48) REACTOME PURINE RIBONUCLEOSIDE MONOPHOSPHATE BIOSYNTHESIS | 13 | 0 | 0.004 | 0.008 |
49) REACTOME REGULATION OF GLUCOKINASE BY GLUCOKINASE REGULATORY PROTEIN | 42 | 0.044 | 0.031 | 0.044 |