Sample number | qPCR | bNot I-microarrays | Possible reason of mRNA decrease | |
---|---|---|---|---|
 | mRNA decrease | aDNA copy number |  |  |
AC | ||||
1 | 0.39 | + | + | deletion |
2 | 0.15 | - | + | methylation |
4 | 0.29 | - | - | another mechanism |
5 | 0.49 | + | + | deletion |
7 | 0.37 | - | - | another mechanism |
11 | 0.12 | - | - | another mechanism |
16 | 0.29 | - | + | methylation |
17 | 0.12 | - | + | methylation |
SCC | ||||
23 | 0.16 | - | + | methylation |
25 | 0.13 | + | + | deletion and methylation |
26 | 0.21 | - | + | methylation |
27 | 0.39 | + | + | deletion and methylation |
43 | 0.48 | - | + | deletion |
46 | 0.14 | - | + | methylation |
52 | 0.06 | - | + | methylation |
53 | 0.46 | - | + | methylation |
54 | 0.08 | - | + | methylation |
55 | 0.26 | - | - | another mechanism |