Table 2 Validation of 'Inferred LOH Regions Generated by the HMM Method
From: A new method to detect loss of heterozygosity using cohort heterozygosity comparisons
Sample | No. of Regions | Mean Region Size (bp) | Regions within 100 kb of LOH | Mean Distance from LOH (bp) |
|---|---|---|---|---|
1 | 185 | 1,123,018 | 91% | 33,850 |
2 | 187 | 1,003,721 | 78% | 154,242 |
3 | 121 | 847,306 | 62% | 230,310 |
4 | 206 | 892,220 | 97% | 5,189 |
Total | 699 | 975,359 | 82% | 91,619 |