Cost-effectiveness analysis of colorectal cancer screening with stool DNA testing in intermediate-incidence countries
© Wu et al. 2006
Received: 04 November 2005
Accepted: 24 May 2006
Published: 24 May 2006
Skip to main content
© Wu et al. 2006
Received: 04 November 2005
Accepted: 24 May 2006
Published: 24 May 2006
The aim of this study is to compare the cost-effectiveness of screening with stool DNA testing with that of screening with other tools (annual fecal occult blood testing, flexible sigmoidoscopy every 5 years, and colonoscopy every 10 years) or not screening at all.
We developed a Markov model to evaluate the above screening strategies in the general population 50 to 75 years of age in Taiwan. Sensitivity analyses were performed to assess the influence of various parameters on the cost-effectiveness of screening. A third-party payer perspective was adopted and the cost of $13,000 per life-year saved (which is roughly the per capita GNP of Taiwan in 2003) was chosen as the ceiling ratio for assessing whether the program is cost-effective.
Stool DNA testing every three, five, and ten years can reduce colorectal cancer mortality by 22%, 15%, and 9%, respectively. The associated incremental costs were $9,794, $9,335, and $7,717, per life-year saved when compared with no screening. Stool DNA testing strategies were the least cost-effective with the cost per stool DNA test, referral rate with diagnostic colonoscopy, prevalence of large adenoma, and discount rate being the most influential parameters.
In countries with a low or intermediate incidence of colorectal cancer, stool DNA testing is less cost-effective than the other currently recommended strategies for population-based screening, particularly targeting at asymptomatic subjects.
Because of the high incidence, long preclinical period, and availability of treatment which gives a favorable prognosis with early diagnosis, screening for colorectal cancer (CRC) has been shown to lead to substantial mortality reductions in Western countries; 15–33% with fecal occult blood testing (FOBT), 33% with flexible sigmoidoscopy and 57% with colonoscopy [1–7]. The U.S. Multisociety Task Force on Colorectal Cancer has therefore recommended multiple options for screening people at average risk of CRC including annual FOBT, flexible sigmoidoscopy every 5 years, and colonoscopy every 10 years .
Given this choice of effective screening tools, the deciding factor amongst alternatives could be efficacy, performance (sensitivity and specificity), acceptability, feasibility, compliance, and clinical capacity. Colonoscopy, for example, has been recommended as one of the screening options in the USA because of high sensitivity and specificity . However, in countries with a shortage of medical endoscopic manpower the resulting increased demand for colonoscopy may render such a scheme unworkable. In addition, the uptake of colonoscopy is likely to depend upon local social and cultural issues.
Recently, a new method for detecting adenoma and invasive CRC, known as stool DNA testing, has been suggested as a potential screening tool [8, 9]. It analyzes the DNA contained in stools, through natural exfoliation, and detects alterations. The sensitivity of stool DNA testing, based on symptomatic cases, has been reported as between 36% and 82% for advanced adenoma and between 61% and 100% for invasive cancer, and the specificity has been estimated at between 89% and 100% in clinical studies [10–15]. A recent large prospective study, targeting average-risk, asymptomatic subjects aged 50 years or older, reported more conservative results when using stool DNA testing as a screening tool; sensitivities of 15% and 52% respectively for adenoma and invasive cancer . Nevertheless, stool DNA testing was found significantly better than the fecal occult blood test . Since the costs associated with stool DNA testing are considerable the issue of whether the required expenditure could be offset by future savings (brought about by a reduction in the number of advanced cases needing treatment) must be addressed before stool DNA testing, as a population-based screening tool for average-risk, asymptomatic subjects, can be introduced. This is particularly important for countries with a low or intermediate, but nevertheless dramatically increasing, incidence of CRC.
In Taiwan for instance, CRC has been ranked as the fourth most common cancer and accounted for 11% of cancer cases and 12% of cancer deaths in 2000 . The age-adjusted incidence has increased by 50%, from 19.4 per 100,000 in 1995 to 28.3 per 100,000 in 2000, while the associated mortality has increased from 11.3 to 12.7 per 100,000.
The aim of this study is therefore to perform a decision analysis using a Markov model to compare the effectiveness and cost of stool DNA testing with other conventional screening strategies. The cost-effectiveness analysis compares triennial, five-yearly, and ten-yearly stool DNA testing (DNA3, DNA5, and DNA10), with no screening (No Screening), annual FOBT (FOBT1), five-yearly flexible sigmoidoscopy (SIGM5), and ten-yearly colonoscopy (COLO10).
We developed a Markov model by using DATA Version 3.5 (TreeAge Software) to consider several screening strategies for CRC, including DNA3, DNA5, DNA10, FOBT1, SIGM5, COLO10, and No Screening. Subjects at average-risk of developing CRC were screened from age 50 years until age 75 or death. For each Markov decision, all possible transition states radiated from the decision node with 1-year Markov cycles. Effectiveness was defined as additional life-years gained as a result of screening.
λ1(t) = λ10γtγ -1
Base-case estimates and ranges used in sensitivity analysis
Base-Case Values (Range)
The disease natural history and prognosis
Prevalence of colorectal neoplasm at age 50 years
2–4, 17, 21*
2–4, 17, 21*
Preclinical early CRC
2–4, 17, 21*
Preclinical late CRC
2–4, 17, 21*
Annual transition rates
Normal to small adenoma (λ 1(t))
at age 50 years
2–4, 17, 21*
at age 55 years
2–4, 17, 21*
at age 60 years
2–4, 17, 21*
at age 65 years
2–4, 17, 21*
at age 70 years
2–4, 17, 21*
Small adenoma to large adenoma (λ 2)
2–4, 17, 21*
Large adenoma to preclinical early CRC (λ 3)
2–4, 17, 21*
Preclinical early CRC to preclinical late CRC (λ 4)
Preclinical early CRC to clinical early CRC (λ 5)
Preclinical late CRC to clinical late CRC (λ 6)
Early CRC to CRC death (λ 7)
Late CRC to CRC death (λ 8)
Screening and diagnostic test characteristics
Flexible sigmoidoscopy reach
Stool DNA testing
Flexible sigmoidoscopy and colonoscopy
Stool DNA testing
Complication of colonoscopy
Perforation rate, %
Death rate due to perforation, per 100,000
Stool DNA testing
Treatment and confirmation
Initial cost for early CRC
Initial cost for late CRC
Continuing cost for CRC
Terminal Care for CRC
Complication cost for perforation
Complication cost for death
Discount rate, %
Following Cox and Miller , Duffy et al  and Chen et al , the corresponding annual transition probabilities from one state to another can be obtained by converting the transition rates. The Markov model specifying the transitions between states in Figure 1 illustrates the progressive property of model. At any instant a one-step transition from small adenoma to clinical CRC is not allowed but a multi-step transition is possible, although the likelihood of transition from small to large adenoma, and from large adenoma to pre-clinical CRC, within a year starts low but increases with time. To build this feature into our model, we allowed multiple-step transitions even within one cycle to be possible although the chance is low. Thus, although small adenoma has only a slim chance of progressing through large adenoma, preclinical early CRC, and then to clinical early CRC chronologically within one cycle but our model nevertheless allows for the possibility. Furthermore, since we wanted to simulate a screening scenario, the initial state may be normal, adenoma, or preclinical CRC with the corresponding prevalences at age 50 years. However, there are still lines emanating from the root Markov node to clinical CRC, CRC death, and other death, but the probabilities of these states at the first cycle (initial probabilities) are all zero.
Adenoma detected by screening will be removed by polypectomy during first colonoscopy. In the light of the American Cancer Society guidelines on screening and surveillance for the early detection of colorectal adenomas and cancer, the removal of adenoma will be followed up with surveillance . Any recurrence of neoplasm will follow the disease natural history. Subjects with small adenoma will receive colonoscopy after 5 years. Then, if normal, they return to the normal state in the natural history and are screened according to the standard screening strategies. A similar procedure is applied to subjects found to have a large adenoma. They will receive colonoscopy three years after the initial polypectomy and, assuming no adenoma after two repeated colonoscopies, return to the normal state in the natural history mode.
Base-case estimates of the disease natural history and prognosis, screening and diagnostic test characteristics, and costs for cost-effectiveness analysis were abstracted from published literature and are listed in Table 1. Note that the base-case estimates of sensitivity and specificity of stool DNA testing were obtained from the Imperiale et al  study that has been so far the only one considering average risk asymptomatic subjects aged 50 years.
Parameters for the disease natural history and prognosis were derived from previous studies [2–4, 17, 22–24]. The transition rates between various invasive carcinoma states, λ 4- λ 6, were obtained from selective screening for CRC, the Taiwan Multicenter Cancer Screening (TAMCAS) Project . Regarding prevalence rate of adenoma, the prevalence estimates for large adenoma in previous randomised trials [2–4] and the cumulative risk of 35% at 20 years of carcinoma developing from large adenoma  coupled with the age-specific CRC incidence rates in Taiwan in 2000 , were used to project the age-specific preclinical incidence of small adenoma, λ 1(t) (assuming a Weibull distribution), the transition rate from small to large adenoma, λ 2, (assuming an exponential distribution) and the transition rate from large adenoma to preclinical early CRC , λ 3 (assuming an exponential distribution). The estimated age-specific preclinical incidences of small adenoma are shown in Table 1. Assuming survival time follows exponential distribution, the parameters for survival with clinical CRC, λ 7 and λ 8, were derived from the survival probabilities for each stage of CRC  after weighting the distribution of CRC stage among the control groups according to previous studies [2–4]. Age-specific mortality, μ (t), for other cause of death, refer to Taiwan's vital statistics in 2002 . The prevalence of colorectal neoplasm at age 50 years was obtained by converting the transition rates mentioned above and are shown in Table 1.
The estimated parameters for test characteristics such as sensitivity, specificity, and complication with colonoscopy were derived from previous studies [2–4], [10–14, 16, 25–40]. This sensitivity is allowed to vary with state. The base-case estimates of sensitivity of stool DNA testing were 8% for small adenoma, 15% for large adenoma and 52% for invasive cancer . The base-case estimate of specificity of stool DNA testing was 94% .
In the light of reality from previous study, as compliance rates and referral rate vary with screening tools, 60% of compliance rate was assumed for FOBT referring to evidence from several randomised trials [1–4], and 40% of compliance rate was assumed for sigmoidoscopy and colonoscopy in the light of reality from previous studies [41, 42]. The compliance with stool DNA testing was assumed to be the same with FOBT. The referral rate to diagnostic colonoscopy after positive findings with screening was assumed to be 85% according to several randomised trials [1–4].
Costs are expressed in US dollars (1 US dollar = 34 New Taiwanese dolloar, exchange rate on the basis of the year 2004). As the cost-effectiveness analysis is carried out from the third-party payer perspective only direct costs were calculated in this study, including those relating to the screening itself, treatment and diagnostic tests (adenoma and CRC only), complications from colonoscopy and surveillance (adenoma only). All estimates of cost refer to the price mandated by the Bureau of National Health Insurance in 2004 or expert opinion. Screening costs, except for stool DNA testing, are based on Medicare Payments by the Bureau of National Health Insurance. The cost of stool DNA testing was estimated by experts after considering the cost of the required laboratory manpower and relevant materials in Taiwan. Treatment and confirmation costs, which relate to polypectomy, biopsy, and pathological examination, were acquired from Medicare Payments by the Bureau of National Health Insurance. The lifetime costs for CRC encompass the initial costs regarding surgery, chemotherapy and radiotherapy, the continuing costs of follow-up after potentially curative therapy, and the eventual cost of terminal care. For the purposes of this costing, expenditure on terminal care is only included for those who (in our models) die from CRC. For early CRC, the initial cost includes only surgery. All future costs and life-years were discounted to the present value at an annual rate of 3%.
The comparisons between the "No Screening" and other screening strategies were first evaluated on the basis of the incremental cost-effectiveness ratio (ICER), which is defined as the difference between the two screening groups in terms of cost divided by the difference between them in terms of effectiveness, i.e. the extra cost required to save additional life-years. The ICERs for stool DNA testing as compared to the other screening strategies were also calculated. A cost of $13,000 per life-year saved, which is approximately equivalent to per capita GNP in Taiwan in 2003, was chosen as the ceiling ratio for assessing whether the program is cost-effective.
As several parameters are uncertain, including the prevalence of colorectal neoplasm at age 50 years, transition rates, sensitivity and specificity of screening tool, cost of per unit of stool DNA testing, compliance to screening tool, referral rate to diagnostic colonoscopy, and cost of treatment, a series of one-way sensitivity analyses were performed to assess the influence of changing these parameters on the ICER results. The ranges of variables used in sensitivity analysis are shown in Table 1. Note that improved or worsened sensitivity for small adenoma may lead to changes in sensitivity further down the line, for example, with regard to large adenoma. In this study we assume that any changes in sensitivity to detect small adenoma are paralleled by an equivalent change in sensitivity to detect large adenoma. Similar assumptions were made regarding early and late invasive cancer.
Furthermore, as the previous studies have rather dissimilar estimates for sensitivity and specificity of stool DNA testing, sensitivity analyses were emphasized on the demonstration of the influence of sensitivity and specificity regarding stool DNA testing using the moderate case scenario in which the sensitivities and specificity were obtained from the meta-analysis based on previous studies [10–13, 16], and the best case scenario, in which the sensitivities were mainly based on the estimates from Ahlquist study  except that the sensitivity of small adenoma was also based on Imperiale study . The sensitivity of stool DNA testing for small adenoma, large adenoma, and colorectal cancer, and the specificity are 8%, 18%, 85%, and 94% in the moderate case scenario. The corresponding estimates in the best case scenario are 8%, 82%, 91%, and 93%, respectively.
As the compliance varies with the screening tool and county, it is important to explore the influence of compliance rate to each screening tool. Therefore, a range of values between 10% and 100% were used in the sensitivity analysis to assess the impact of compliance with each screening tool.
Simulated results for screening strategies to prevent CRC*
Total cases of CRC, n
CRC deaths, n
Perforation deaths, n
Reduction in CRC incidence, %
Reduction in CRC mortality, %
Life expectancy, year
Total costs, thousand $
Incremental life-year saved, year
Incremental cost, thousand $
Incremental cost ($)/life-years saved compared with no screening
Incremental cost ($)/life-years saved:
DNA3vs. other screening strategies
DNA5 vs. other screening strategies
DNA10 vs. other screening strategies
The ICERs for other screening strategies, as compared to "No Screening" are also listed in Table 2. In this setting, COLO10 and FOBT1 are both the most cost-effective strategies which are more effective and less costly than No Screening. The incremental costs for DNA3, DNA5, and DNA10, respectively, were calculated as $9,794, $9,335, and $7,717 per life-year saved, which is much less cost-effective than other screening strategies. Stool DNA testing strategies were out-performed by all the other screening strategies. However, all screening strategies (including stool DNA testing) are cost-effective compared to No Screening.
One-way sensitivity analysis.
Base- Case Values
Sensitivity Analysis Values
Incremental Cost($)/Life-Year Saved
Sensitivity of DNA for small/large adenoma
11,546 – 1,742
11,122 – 1,030
9,369 – 269
Sensitivity of DNA for preclinical CRC
9,921 – 7,078
9,454 – 6,752
7,817 – 5,528
Cost per DNA
4,344 – 2,0706
4,194 – 19,628
3,271 – 1,6618
Compliance with DNA
9,070 – 10,423
9,047 – 9,582
7,630 – 7,787
Referral rate to diagnostic colonoscopy
85,266 – 8,294
83,868 – 7,843
73,826 – 6,396
Prevalence of large adenoma
18,969 – 5,387
18,184 – 5,114
15,657 – 4,042
6,938 – 15,674
6,738 – 14,864
5,107 – 13,281
Since the estimates for sensitivity of stool DNA testing vary from study to study, scenario analyses were conducted to assess the impact of sensitivity of stool DNA testing strategy (see Figure 4). In the moderate case scenario in which the sensitivities and specificity were mainly derived from the meta-analysis based on previous studies [10–13, 16], the estimated ICER were similar to the base-case estimates (worst case scenario) which based on Imperiale study  (see two bottom curves in Figure 4). The ICER for DNA3, DNA5, and DNA10 are much less cost-effective than other screening strategies but still remained cost-effective compared to No Screening. Assuming the best case scenario in which the sensitivities were mainly based on the estimates from Ahlquist study , stool DNA testing strategies became comparable with other screening strategies, and the incremental costs for DNA3, DNA5, and DNA10, respectively, were calculated as $3,825, $3,036, and $2,194 per life-year saved. DNA3 and DNA5 saved more lives than FOBT1 and COLO10, but with high cost.
The present study is a formal economic evaluation of DNA3, DNA5, and DNA10 in relation to several alternatives (No Screening, FOBT1, SIGM5, and COLO10) using Taiwanese data on colorectal cancer incidence and disease natural history, sub-classified by adenoma size and Dukes' stage in invasive carcinoma. The findings from this study suggest that all of the screening strategies are reasonably cost-effective in relation to No Screening. However, the stool DNA testing strategies were the least cost-effective. COLO10 and FOBT1 are the most cost-effective strategy. Nevertheless, the feasibility of opting for colonoscopy as screening tool for average-risk groups may be questionable due to the shortage of medical endoscopic manpower and the risk of perforation associated with colonoscopy. Stool DNA testing would be preferable to the other screening strategies if the sensitivity for both adenoma and CRC were high enough, as seen in the best case scenario of sensitivity analysis from the Ahlquist study , and if the cost of the test could be lowered through economies of scale like the example of hepatitis B vaccination the price of which has dramatically fallen due to the advent of universal program in 1990s . However, the interpretation of the finding in the best case scenario should be taken with great caution because subjects enrolled in Ahlquist study  was based on clinical series patients rather than asymptomatic subjects from average-risk population .
It should be noted that our focus on this study was to assess whether stool DNA testing was cost-effective provided stool DNA testing can be used as another alternative choice for population-based screening. The incremental cost-effectiveness analysis by pairwise comparison across different screening tools (i.e. colonoscopy vs. stool DNA testing) was therefore not attempted.
Although stool DNA testing has been proposed in recent years its application to mass screening for colorectal cancer has not been evaluated. The major deterrent has been doubt over the performance of test. Previous studies show a wide range of sensitivities for stool DNA testing, ranging from 15% to 82% for large adenoma and from 50% to 100% for invasive CRC [10–13, 16]. This variation may often be attributed to differences in the way asymptomatic subjects or symptomatic cases were selected, although this was not the case in the Imperiale et al study . The largest study to focus on asymptomatic subjects (the major target of mass screening) showed 8% sensitivity for small adenoma, 15% for large adenoma and 52% for invasive CRC . False negative cases, as a result of low sensitivity, may lower its effectiveness as a tool for screening asymptomatic subjects in the general population. However, to integrate state-of-world information obtained form previous studies, we used the meta-analysis to obtain the estimate by taking all previous studies into account as the moderate case scenario. However, the estimate of sensitivity of adenoma has been largely affected by the Imperial study  because it is the largest study up to date on screening for colorectal cancer with stool DNA testing. The estimate based on meta-analysis for the sensitivity of cancer has been estimated as 85% by weighting the inverse variance of each study.
It could be argued that stool DNA testing screening is to be more expensive than other screening tools. This may be true at the inception of screening strategy but with widespread use, we might reasonably expect savings due to economies of scale. Genetic epidemiology is still in its infancy but the development of genetic chip technology and DNA testing advances may soon facilitate the development of simple commercial stool DNA testing kits, which would be considerably cheaper.
Very few studies have addressed the economic aspects of adopting stool DNA testing as screening tool for use in the general population. Only Song et al  and Leshno et al  have performed a study on cost-effectiveness, comparing fecal DNA testing with conventional CRC screening. The parameters in the former study are based on Western countries with a high prevalence of CRC, and the parameters in the latter study are based on Israel which also has a high incidence rate of CRC . To the best of our knowledge, no similar studies on stool DNA testing have been conducted in countries with low or intermediate incidence of CRC. Furthermore, the base-case estimates of sensitivity and specificity for stool DNA testing may vary across studies. The sensitivity and the specificity used in Leshno study are 70%, 82%, 91%, and 90% for small adenoma, large adenoma, preclinical CRC, and specificity, respectively, which were similar to our best case scenario, and only annual stool DNA testing has been considered . The corresponding estimates in Song study are 40%, 40%, 65%, and 95%, respectively . Compared with the two previous studies [44, 45], the base-case estimates in our study are the most conservative ones which only base on the population-based study . However, despite the diversified parameter regarding sensitivity and specificity, our findings that stool DNA testing is cost-effective compared to No Screening but inferior to conventional screening methods such as FOBT and colonoscopy are consistent with Song et al's and Leshno et al's findings [44, 45].
The reported ICERs in this study are much lower than that reported in other cost-effectiveness analysis [44, 47, 48]. This discrepancy can be explained by the low cost of screening tool, and other relevant cost for CRC treatment and diagnosis used in this study which represents the reality in Taiwan. When we used the cost based on the Western country as our base-case parameters , given perfect compliance and perfect referral rate as assumed in the previous studies, the ICERs are comparable with the previous studies [44, 47, 48]. The ICER for FOBT1, SIGM5, and COLO10 compared with No Screening are estimated as $2,376, $20,206 and $13,831 per life-year saved, respectively. However, all the stool DNA testing strategies are not cost-effective and the ICERs inflate to approximately $115,000 per life-year saved for DNA10 compared with No Screening.
As far as the validity of our simulation model is concerned, our results obviously depend on the parameters chosen for the natural history part of the model. Three findings lead us to believe that our simulated model is adequate. Firstly, the predicted cumulative incidence of CRC in our study, 34 per 1,000, is close to the observed one, 37 per 1,000 . Secondly, our sensitivity analyses demonstrates that changes to the upper and lower bounds of our estimates do not lead to substantial changes in our results. Thirdly, to check whether our simulated results on the effectiveness of FOBT test are consistent with those reported in several randomized trials [1–4], we applied 60% (56.5%~67%) compliance rate of FOBT and 85% referral rate to diagnostic colonoscopy and identical transition parameters based on base-case parameters, and shortened follow-up year to 10 years as seen in randomized trial, the predicted mortality reduction for annual FOBT screening and biennial FOBT screening is 20% and 13%, respectively, the latter of which is close to the findings from several randomised trials with two-yearly inter-screening interval, indicating 16%, 21%, and 15% mortality reduction conducted in Burgundy (France) , Funen (Denmark) , and Nottingham (UK) , respectively. For the incidence, the incidence ratio was estimated as 0.80 (annual FOBT) after follow-up for 18 years, which was close to the estimate reported in randomized trial .
Since this study was conducted from a third-party payer perspective, we therefore adopted the price mandated by the Bureau of National Health Insurance (95% population covered) as the cost and only direct costs were included. However, indirect costs such as production loss due to attending to screening or due to disease should be considered from the societal viewpoint. This could be the subject of future studies.
Our study has, however, one limitation as our proposed model assumes an adenoma to carcinoma sequence, which accounts for the majority of CRCs. Non-polypoid cases are not taken into account. However, as only a fraction of CRCs are non-polypoid and the cost-effectiveness analysis addresses the relative comparisons across screening strategies, the incorporation of the occurrence of non-polypoid tissue is unlikely to substantially affect the results.
In conclusion, an economic evaluation of CRC screening with stool DNA testing was performed in a country with an intermediate incidence of CRC. Our results suggest that stool DNA testing is less cost-effective than other currently recommended strategies for population-based average-risk subjects.
The author(s) thank Dr. Chao-Sheng Liao, Shin Kong Wu Ho-Su Memorial Hospital, Taipei, for acquisition of data on cost. This study has not been supported by any research fund.
This article is published under license to BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.