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Table 2 Top 100 genes differentially expressed in metastatic samples compared to primary tumor samples

From: Gene expression profiles of prostate cancer reveal involvement of multiple molecular pathways in the metastatic process

Gene Symbol

Probe_ID

d_Value

Fold Change

EIF1A

34278_at

19.46

3.56

AR

1577_at

16.04

10.09

AK3

48822_s_at

15.18

3.03

EIF1A

663_at

14.17

2.69

PABPC1

44806_at

14.17

3.57

---

45092_at

13.16

3.66

HSPD1

37720_at

12.80

2.80

---

54219_at

12.78

3.23

LCHN

58324_at

12.39

3.49

MLL5

58271_at

12.15

2.45

---

59350_at

11.98

3.22

---

49558_at

11.93

2.73

LARP

41829_at

11.60

3.14

IBTK

52482_at

11.41

3.30

GIT1

43805_f_at

11.41

2.49

---

56056_at

11.31

2.64

FLJ20736

64662_at

11.21

4.32

AR

1578_g_at

11.20

6.19

RALA

39253_s_at

11.19

3.61

HN1

56429_g_at

11.17

2.89

---

54236_at

11.04

3.82

HSPCA

32316_s_at

10.94

2.68

NUCKS

59778_f_at

10.93

2.44

SOD1

36620_at

10.87

2.16

K-ALPHA-1

32272_at

10.72

2.23

---

46558_at

10.70

4.70

---

33207_at

10.62

2.25

VPS28

43061_i_at

10.61

2.19

BASP1

32607_at

10.57

4.15

CBX4

51842_at

10.49

3.06

---

43680_at

10.45

4.85

GRB2

33855_at

10.44

2.55

---

63147_at

10.43

3.86

UGT2B15

63915_f_at

10.35

3.07

METTL2

48730_s_at

10.26

2.24

---

59101_at

10.11

7.12

MLL5

58690_at

10.02

2.24

G3BP

41133_at

10.00

2.25

AK3

32331_at

9.96

2.31

H2AV

39092_at

9.92

3.25

SDCCAG3

43014_at

9.91

6.04

FLJ10613

59989_s_at

9.82

2.20

YY1

891_at

9.70

2.08

---

49326_at

9.59

2.20

---

42646_at

9.50

5.45

LOC90462

54342_at

9.44

4.55

---

55393_at

9.42

3.51

DDX17

41260_at

9.35

4.97

---

63115_at

9.34

3.07

---

57160_at

9.34

2.11

ETR101

36097_at

-6.98

-3.85

MAGED2

34859_at

-7.00

-2.22

---

50411_at

-7.00

-3.57

MGC4342

48094_at

-7.01

-2.22

HT023

43461_g_at

-7.01

-2.78

SFRP1

32521_at

-7.02

-6.25

CRYL1

56407_at

-7.04

-2.04

REA

37364_at

-7.05

-2.17

ARL5

59499_at

-7.08

-2.50

NY-REN-45

57833_s_at

-7.09

-2.08

POMT1

46723_at

-7.12

-3.23

MRC2

63996_at

-7.13

-2.38

B3GALT3

53879_at

-7.16

-3.13

NR4A1

280_g_at

-7.21

-7.14

MUM2

65822_at

-7.23

-2.38

LOC113246

46712_at

-7.31

-2.17

GLTSCR2

61109_at

-7.33

-2.44

FLJ20542

50164_at

-7.36

-3.13

APCDD1

56272_at

-7.42

-2.70

AIM1

32112_s_at

-7.45

-3.70

FOS

1916_s_at

-7.51

-7.69

FOS

1915_s_at

-7.56

-9.09

PILB

43370_at

-7.56

-2.08

C20orf178

45298_at

-7.59

-2.13

B3GAT1

65859_at

-7.60

-2.13

FLJ10283

46261_at

-7.68

-2.27

RAB34

45269_at

-7.71

-10.00

FLJ20069

61701_at

-7.71

-3.23

PYGB

59669_at

-7.77

-2.70

RPS27L

56410_at

-7.80

-2.27

TOMM20

36198_at

-7.91

-2.13

---

43819_g_at

-7.91

-3.13

STAT6

41222_at

-7.92

-2.78

SELM

64449_at

-7.95

-9.09

BOC

52999_at

-8.15

-4.17

---

44746_at

-8.20

-2.13

SMBP

46307_at

-8.28

-3.23

WNT5B

61330_at

-8.34

-3.33

FLJ22386

50198_at

-8.43

-4.55

WNT5B

58787_at

-8.61

-2.27

ZDHHC4

45807_at

-8.81

-2.13

YF13H12

36170_at

-8.84

-2.08

HPIP

38063_at

-9.04

-2.33

ANXA11

55664_at

-9.16

-2.94

WNT5B

66142_s_at

-9.33

-4.17

WAS

38963_i_at

-9.43

-2.50

JFC1

44820_f_at

-9.45

-3.33

JFC1

48805_f_at

-9.48

-2.44

WNT5B

61292_s_at

-9.86

-7.14

CIRBP

39864_at

-10.94

-3.70

  1. Gene expression data from the Affymetrix platform for 25 metastatic and 64 primary tumor samples was analyzed for differential gene expression by SAM. The differentially expressed genes with the lowest FDR were sorted by fold change. The top 100 genes, organized by fold change are shown.