Table 6 Genes with high expression in tissue culture samples
From: The influence of tumor size and environment on gene expression in commonly used human tumor lines
Function | Affymetrix ProbeSet ID | Gene Symbol | LocusLink ID | Sequence ProbeSet Derived From | Gene Title |
|---|---|---|---|---|---|
Cell division | |||||
| Â | 34851_at | STK6 | 6790 | AF011468 | serine/threonine kinase 6 |
| Â | 33346_r_at | TUBG1 | 7283 | M61764 | tubulin, gamma 1 |
| Â | 35995_at | ZWINT | 11130 | AF067656 | ZW10 interactor |
| Â | 37171_at | KNSL5 | 9493 | X67155 | kinesin-like 5 (mitotic kinesin-like protein 1) |
Cell cycle | |||||
| Â | 34736_at | CCNB1 | 891 | M25753 | cyclin B1 |
| Â | 37458_at | CDC45L | 8318 | AJ223728 | CDC45 cell division cycle 45-like (S. cerevisiae) |
| Â | 38804_at | CSE1L | 1434 | AF053641 | CSE1 chromosome segregation 1-like (yeast) |
Translation/RNA binding/RNA splicing | |||||
| Â | 35323_at | EIF3S9 | 8662 | U78525 | eukaryotic translation initiation factor 3, subunit 9 eta, 116 kDa |
| Â | 38679_g_at | SNRPE | 6635 | AA733050 | small nuclear ribonucleoprotein polypeptide E |
| Â | 41460_at | RBM14 | 10432 | AF080561 | RNA binding motif protein 14 |
Transcription/transcription factor | |||||
| Â | 39664_at | CKN1 | 1161 | U28413 | Cockayne syndrome 1 (classical) |
| Â | 41332_at | POLR2E | 5434 | D38251 | polymerase (RNA) II (DNA directed) polypeptide E, 25 kDa |
Unknown or other functions | |||||
| Â | 35715_at | DKFZP564M082 | 25906 | AL080071 | DKFZP564M082 protein |
| Â | 40758_at | ICT1 | 3396 | X81788 | immature colon carcinoma transcript 1 |
| Â | 1749_at | GCDH | 2639 | AD000092 | glutaryl-Coenzyme A dehydrogenase |
| Â | 40134_at | ATP5J2 | 9551 | AF047436 | ATP synthase, subunit f, isoform 2 |
| Â | 41400_at | TK1 | 7083 | K02581 | thymidine kinase 1, soluble |