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Table 1 Fold changes in ARCAP-E cells (combined vorinostat/genistein vs. DMSO) of critical genes involved in apoptosis, DNA damage checkpoint, and chromatin structure and remodeling

From: Genistein cooperates with the histone deacetylase inhibitor vorinostat to induce cell death in prostate cancer cells

Symbol

Synonym

Fold Change

Network

Symbol

Synonym

Fold Change

Network

GZMB

Granzyme B

6.9

Apoptosis

CTNNB1

β-catenin

1.7

Apoptosis

TNFRSF6B

Decoy Receptor 3

4.8

Apoptosis

MTA2

---

1.7

Chromatin

BIRC3

c-IAP2

4.1

Apoptosis

CHEK2

RAD53

1.6

DNA Checkpoint

TNF

TNFα

3.9

Apoptosis

BUB1

---

1.6

DNA Checkpoint

DFFA

ICAD

3.8

Apoptosis

TGFB1I1

ARA55

−1.8

Apoptosis

BARD1

BRCA1 Associated

3.0

DNA Checkpoint

TNFSF10

TRAIL

−1.9

Apoptosis

MAD2L1

---

2.4

DNA Checkpoint

CREBBP

CBP

−2.1

Chromatin

HAT1

Histone Acetyltrans-ferase 1

2.4

Chromatin

SIRT1

SIR2L1

−2.1

Chromatin

GZMH

Granyme H

2.3

Apoptosis

ATM

TEL1

−2.2

DNA Checkpoint

AURKB

Aurora Kinase B

2.2

DNA Checkpoint

TNFRSF14

LIGHTR

−3.7

Apoptosis

BCL10

---

2.0

Apoptosis

BIRC7

Livin

−4.8

Apoptosis

BRCA1

---

1.9

DNA Checkpoint

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