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Table 4 CRC risk predictive accuracy of recurrence, metastasis, or death by the concurrent gene prognostic model

From: Colorectal cancer concurrent gene signature based on coherent patterns between genomic and transcriptional alterations

CRC case number

GEO

Outcome

Compound covariate (%)

Diagonal linear discriminant (%)

1-NN (%)

3-NN (%)

Nearest centroid (%)

SVM (%)

Bayesian compound covariate (%)

CV-AUC from Bayesian compound covariate

100

GSE5206

Recurrence

82

83

75

80

80

77

86

0.833

70

GSE9348

Metastasis

70

76

79

81

70

73

85

0.768

53

GSE18088

Relapse

75

75

75

75

77

72

89

0.863

111

GSE18105

Metastasis

57

53

66

60

56

61

N/A

0.548

75

GSE64857

Recurrence

61

60

64

64

63

57

81

0.684

  1. CRC Colorectal cancer, GEO Gene expression omnibus, NN Neural network, SVM Support vector machine, CV-AUC Cross-validation area under receiver operating characteristic curve, N/A Not applicable