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Table 3 Primers for Real-time PCR and siRNA/shRNA

From: Tenascin-C promotes bladder cancer progression and its action depends on syndecan-4 and involves NF-κB signaling activation

Gene ID

Gene

Primers

NM_001145138.1

P65

F

ACG AAT GAC AGA GGC GTG TAT AAG G

R

CAG AGC TGC TTG GCG GAT TAG

NM_002046.4

GAPDH

F

AAC AGC GAC ACC CAT CCT C

R

CAT ACC AGG AAA TGA GCT TGA CAA

NM_004360.3

E-Cadherin

F

TGC CCA GAA AAT GAA AAA GG

R

GTG TAT GTG GCA ATG CGT TC

NM_001792.3

N-Cadherin

F

ACA GTG GCC ACC TAC AAA GG

R

CCG AGA TGG GGT TGA TAA TG

NM_003380.3

Vimentin

F

GAG AAC TTT GCC GTT GAA GC

R

GCT TCC TGT AGG TGG CAA TC

NM_005985.3

Snail1

F

ACC CCA ATC GGA AGC CTA ACT

R

GGT CGT AGG GCT GCT GGA A

NM_004530.4

MMP2

F

CTC ATC GCA GAT GCC TGG AA

R

TTC AGG TAA TAG GCA CCC TTG AAG A

NM_004994.2

MMP9

F

TGA CAG CGA CAA GAA GTG

R

CAG TGA AGC GGT ACA TAG G

NM_002999.3

Syndecan-4

F

CCA GTT TGA TGT TGC TGG GTG GTT

R

AGC CCT AGA GCC TGA AGA AAG CAA

Syndecan-4 siRNA

Si

5 -AAG GCC GAT ACT TCT CCG GAG-3

Sc

5 -AAG GCT CTC CGG AGC GATA CT-3

NM_002160.3

Tenascin-C

F

AGC TTC CAA GAA ACA CCA CTT C

R

CCA TCC CAG CCA ACC TCA

Tenascin-C shRNA

F

5′-CAC CGC ACC TGA AGG CCT GAA ATT CTT CAA GAG AGA ATT TCA GGC CTT CAG GTG CTT TTT TG-3’

R

5′-GAT CCA AAA AAG CAC CTG AAG GCC TGA AAT TCT CTC TTG AAG AAT TTC AGG CCT TCA GGT GC-3’