Table 2 List of top 20 upregulated and downregulated transcripts in exosomal RNA from HPV-positive cells
Fragment Id | Gene Name | Gene Description | Enrichment Score (FPKM) | P value | ||
|---|---|---|---|---|---|---|
| Â | Â | Â | C33a-Exo | SiHa-Exo | HeLa-Exo | Â |
Upregulated | ||||||
 MSTRG.367518.1 | TBC1D9 | TBC1 domain family member 9 | 0.0 | 318.0 | 0.0 | 1.87E-09 |
 MSTRG.344677.1 | EVC2 | EvC ciliary complex subunit 2 | 0.0 | 1313.3 | 0.0 | 3.99E-11 |
 MSTRG.133308.1 | - | - | 0.0 | 0.0 | 4341.5 | 8.89E-12 |
 ENST00000423783.1 | ACTG1P24 | - | 0.0 | 3.8 | 3570.2 | 6.77E-05 |
 ENST00000478808.2 | USP30-AS1 | - | 3.2 | 10.6 | 7285.6 | 0.000154 |
 ENST00000532136.2 | OR5AM1P | - | 4.7 | 30.0 | 9612.9 | 0.000111 |
 MSTRG.477223.1 | RP11-11N9.4 | - | 17.4 | 195.9 | 20881.6 | 0.000136 |
 MSTRG.72906.1 | - | - | 0.0 | 28.8 | 1423.9 | 0.00012 |
 MSTRG.15951.1 | NFIA | nuclear factor I A | 0.0 | 1.9 | 2700.7 | 0.00013 |
 MSTRG.306972.1 | - | - | 3.2 | 5.0 | 5714.5 | 0.000327 |
 MSTRG.197855.1 | - | - | 0.0 | 40.1 | 1029.7 | 0.000169 |
 MSTRG.42334.1 | - | - | 0.0 | 294.2 | 154.7 | 0.000437 |
 MSTRG.376580.1 | - | - | 0.0 | 16.3 | 633.7 | 0.000542 |
 MSTRG.349353.1 | - | - | 0.0 | 50.7 | 414.9 | 0.000613 |
 MSTRG.292085.1 | CH507-513H4.1 | - | 1.6 | 2.5 | 2853.5 | 0.000539 |
 ENST00000540040.2 | MTRNR2L1 | MT-RNR2-like 1 | 58.5 | 380.0 | 35309.4 | 0.000563 |
 MSTRG.62777.1 | - | - | 4.7 | 47.6 | 3485.3 | 0.000487 |
 MSTRG.117243.1 | ANKS1B | ankyrin repeat and sterile alpha motif domain containing 1B | 3.2 | 27.5 | 2961.0 | 0.000436 |
 MSTRG.7924.1 | LUZP1 | leucine zipper protein 1 | 1.6 | 83.9 | 1241.0 | 0.00037 |
 ENST00000545075.2 | MTRNR2L10 | MT-RNR2-like 10 | 24.5 | 213.5 | 19438.8 | 0.000315 |
Downregulated | ||||||
 MSTRG.496845.1 | RP11-661A12.12 | - | 69.6 | 0.0 | 0.0 | 0.016636 |
 MSTRG.304551.1 | APOBEC3A | apolipoprotein B mRNA editing enzyme catalytic subunit 3A | 104.3 | 0.0 | 0.0 | 0.005624 |
 MSTRG.223388.1 | - | - | 59.3 | 0.0 | 0.0 | 0.024676 |
 MSTRG.198709.1 | - | - | 61.6 | 0.0 | 0.0 | 0.022445 |
 MSTRG.226490.1 | CTD-2189E23.1 | - | 60.9 | 0.0 | 0.0 | 0.023159 |
 MSTRG.344367.1 | - | - | 95.6 | 0.0 | 0.0 | 0.007161 |
 MSTRG.2801.1 | - | - | 58.5 | 0.0 | 0.0 | 0.025481 |
 MSTRG.219083.1 | OACYLP | - | 58.5 | 0.0 | 0.0 | 0.025481 |
 MSTRG.355211.1 | UGT2B17 | UDP glucuronosyltransferase family 2 member B17 | 57.7 | 0.0 | 0.0 | 0.02632 |
 MSTRG.431828.1 | - | - | 56.9 | 0.0 | 0.0 | 0.027195 |
 MSTRG.244195.1 | - | - | 55.3 | 0.0 | 0.0 | 0.029056 |
 MSTRG.277817.1 | AGAP1 | ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 | 56.9 | 0.0 | 0.0 | 0.027195 |
 MSTRG.281076.1 | SNAP25-AS1 | SNAP25 antisense RNA 1 | 50.6 | 0.0 | 0.0 | 0.035696 |
 MSTRG.195412.1 | MYO15A | myosin XVA | 55.3 | 0.0 | 0.0 | 0.029056 |
 MSTRG.545174.1 | - | - | 56.9 | 0.0 | 0.0 | 0.027195 |
 MSTRG.278737.1 | THAP4 | THAP domain containing 4 | 83.8 | 1.3 | 0.0 | 0.028536 |
 MSTRG.304552.1 | APOBEC3A | apolipoprotein B mRNA editing enzyme catalytic subunit 3A | 88.5 | 0.6 | 0.0 | 0.015573 |
 MSTRG.2807.1 | - | - | 86.9 | 0.0 | 0.0 | 0.009282 |
 MSTRG.422941.1 | FILIP1 | filamin A interacting protein 1 | 93.3 | 0.0 | 0.0 | 0.007671 |