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Table 1 Primers used in this study

From: High frequency of enterotoxigenic Bacteroides fragilis and Enterococcus faecalis in the paraffin-embedded tissues of Iranian colorectal cancer patients

Bacterial pathogens

Target Gene

Primer sequence (5–3)

Amplicon (bp)

Annealing Temperature (°c)

Ref

Fusobacterium spp

16 s ribosomal RNA

CCCAAGCAAACGCGATAAGT

GCGTTGCGTCGAATTAAACC

117

58

[1]

ETBF

bft

TGAAGTTAGTGCCCAGATGC

CAGTAAAGCCTTCCAGTCC

150

58

[10]

S. gallolyticus

SodA

AAGCTGCGACAACTCGCTTT

AAGCGTGTTCCCAAACGTCA

150

59

[1]

E. faecalis

16 s ribosomal RNA

CCCTTATTGTTAGTTGCCATCATT

ACTCGTTGTACTTCCCATTGT

144

60

[12]

Universal

16 s ribosomal RNA

AAACTCAAAKGAATTGACGG

CTCACRRCACGAGCTGAC

180

59

[13]