The viral expression and immune status in human cancers and insights into novel biomarkers of immunotherapy

BMC Cancer

Table 1 Viral infection in 33 cancer types from TCGA

TCGA	Tumor samples	Infected samples	Infected fraction	Infected cases
TCGA	Tumor samples	Infected samples	Infected fraction	HPV	HBV	EBV	CMV	HCV	HIV	KSHV	MCV	SV40
CESC	307	289	94.10%	311	2	0	0	0	0	0	0	0
LIHC	377	125	33.20%	4	117	1	0	4	0	0	0	0
LAML	200	55	27.50%	0	0	0	55	0	0	0	0	46
STAD	443	78	17.60%	1	0	43	40	0	1	1	0	0
HNSC	528	77	14.60%	69	2	1	5	0	0	0	0	0
ESCA	185	16	8.60%	0	0	6	11	0	0	0	0	0
COAD	459	19	4.10%	7	0	1	11	0	0	0	0	0
READ	169	7	4.10%	1	0	1	4	0	1	0	0	0
PAAD	185	7	3.80%	2	2	0	3	0	0	0	0	0
BLCA	412	14	3.40%	8	0	0	5	0	0	0	0	1
CHOL	36	1	2.80%	0	1	0	0	0	0	0	0	0
DLBC	50	1	2.00%	0	0	1	0	0	0	0	0	0
UCS	57	1	1.80%	0	0	0	1	0	0	0	0	0
SKCM	470	8	1.70%	1	6	1	0	0	0	0	0	0
OV	602	9	1.50%	1	0	0	7	0	0	0	1	5
SARC	261	4	1.50%	2	2	0	0	0	0	0	0	0
UCEC	559	7	1.30%	6	1	0	0	0	0	0	0	0
MESO	87	1	1.10%	1	0	0	0	0	0	0	0	0
KIRP	291	3	1.00%	2	1	0	0	0	0	0	0	0
LGG	516	5	1.00%	4	1	0	0	0	0	0	0	0
KIRC	535	5	0.90%	4	1	0	0	0	0	0	0	0
LUSC	504	4	0.80%	3	0	0	1	0	0	0	0	0
PRAD	498	4	0.80%	1	3	0	0	0	0	0	0	0
THCA	507	3	0.60%	1	2	0	0	0	0	0	0	0
LUAD	580	1	0.20%	0	0	0	1	0	0	0	0	0
ACC	92	0	0.00%	0	0	0	0	0	0	0	0	0
BRCA	1098	0	0.00%	0	0	0	0	0	0	0	0	0
GBM	599	0	0.00%	0	0	0	0	0	0	0	0	0
KICH	66	0	0.00%	0	0	0	0	0	0	0	0	0
PCPG	179	0	0.00%	0	0	0	0	0	0	0	0	0
TGCT	150	0	0.00%	0	0	0	0	0	0	0	0	0
THYM	124	0	0.00%	0	0	0	0	0	0	0	0	0
UVM	80	0	0.00%	0	0	0	0	0	0	0	0	0
SUM	11,206	744		429	141	55	144	4	2	1	1	52

ISSN: 1471-2407