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Table 1 Reactome top 15 enriched signaling pathways after 6-h exposure of FX-9

From: Novel chemotherapeutic agent FX-9 activates NF-κB signaling and induces G1 phase arrest by activating CDKN1A in a human prostate cancer cell line

No.

Super-pathway

Signaling Pathway

DEGs

Entities

found

FDR

1

IS

Interleukin-4 and Interleukin-13 signaling

8

17/216

2.24e-05

2

MR

Insulin-like Growth Factor-2 mRNA Binding Proteins (IGF2BPs/IMPs/VICKZs) bind RNA

2

6/13

2.24e-05

3

IS

Interleukin-10 signaling

5

11/86

2.73e-05

4

IS

Signaling by Interleukins

17

29/647

4.07e-05

5

IS

Cytokine Signaling in Immune system

26

37/1108

7.63e-04

6

GE

TP53 Regulates Transcription of Genes Involved in G1 Cell Cycle Arrest

2

5/20

0.002

7

ST

Antagonism of Activin by Follistatin

3

3/4

0.003

8

ST

Signaling by TGFB family members

7

9/114

0.006

9

CC

Transcriptional activation of cell cycle inhibitor p21

1

3/6

0.008

10

CC

Transcriptional activation of p53 responsive genes

1

3/6

0.008

11

IS

CLEC7A/inflammasome pathway

1

3/8

0.015

12

IS

Interleukin-1 processing

2

3/8

0.015

13

CR

Cellular Senescence

7

11/200

0.015

14

IS

NOD1/2 Signaling Pathway

5

5/40

0.02

15

IS

Nucleotide-binding domain, leucine rich repeat containing receptor (NLR) signaling pathways

6

6/70

0.035

  1. Superpathways: IS “immune system”, MR “metabolism of RNA”, GE “gene expression (RNA polymerase II transcription)”, CC “cell cycle”, ST “signal transduction”, and CR “cellular response to external stimuli”. The found entities display the number of entries of the DEGs in the signaling pathway.