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Table 1 Clinical and preclinical studies about the association between gut microbiome and the host response to immune checkpoint inhibitors sorted by the category of bacteria

From: The role of the bacterial microbiome in the treatment of cancer

Gut microbiome categories

Mice model, or patients

Impacts

References

Bacteroidetes

Bacteroides

B. fragilis

B. thetaiotaomicron

B. caccae

Bacteroides thetaiotamicron

Bacteroidales

Antibiotic-treated or germ-free mice with MCA205 sarcomas receive Anti-CTLA-4(Ipilimumab) therapy

Improved response and reduced colitis

Vetizou et al. (2015) [41]

MM patients receive Anti-CTLA-4(Ipilimumab) therapy

Reduced the risk of ICIs induced colitis

Dubin et al. (2016) [14]

Adult MM patients receive Ipilimumab, Nivolumab

Ipilimumab plus nivolumab, pembrolizumab

(Anti-CTLA-4 or Anti–PD-1 or combination of Anti-CTLA-4 and Anti–PD-1 therapy)

Predicted effective therapeutic response

Frankel et al. (2017) [21]

MM patients receive Anti-CTLA-4(Ipilimumab) therapy

Bacteroides decreased therapeutic response and decrease risk of ICIs-induced colitis

Chaput et al. (2017) [13]

MM patients, germ-free mice with injection of BP melanoma cell receive Anti–PD-1 therapy

Bacteroidales decreased response, and attenuate systemic and antitumor immunity

Gopalakrishnan et al. (2018) [20]

Bifidobacterium

B. pseudolongum

B. longum

Melanoma mice with distinct commensal microbiota receive Anti–PD-L1 therapy

Delayed melanoma growth, and enhanced CD8 + T cell priming and accumulation in the tumor microenvironment

Sivan et al. (2015) [22]

MM patients receive Anti–PD-1 therapy

Improved therapeutic response, enhanced tumor control, and improved T cell response.

Matson et al. (2018) [19]

germ-free or specific-pathogen-free mice with injection of MC38 colorectal cancer cells receive anti CTLA-4 treatment

B. pseudolongum (belongs to B. pseudolongum) enhanced immunotherapy response through production of the metabolite inosine

Mager et al. (2020) [42]

Faecalibacterium and other Firmicutes

Clostridiales Faecalibacterium

Faecalibacterium prausnitzii

MM patients , germ-free mice with injection of BP melanoma cell receive Anti–PD-1 therapy

Clostridiales Faecalibacterium and Ruminococcaceae Improved response, enhanced systemic and antitumor immunity

Gopalakrishnan et al. (2018) [20]

Adult MM patients receive

Ipilimumab, Nivolumab

Ipilimumab plus nivolumab, pembrolizumab

(Anti-CTLA-4 or Anti–PD-1 or combination of Anti-CTLA-4 and Anti–PD-1 therapy)

Predicted effective therapeutic response

Frankel et al. (2017) [21]

MM patients receive

Anti-CTLA-4(Ipilimumab) therapy

Faecalibacterium and other Firmicutes Improved therapeutic response and higher risk of ICIs induced colitis

Chaput et al. (2017) [13]

Ruminococcaceae

MM patients, germ-free mice with injection of BP melanoma cell receive Anti–PD-1 therapy

Ruminococcaceae Improved response, and enhanced cancer immunity

Gopalakrishnan et al. (2018) [20]

Collinsella aerofaciens

MM patients receive Anti–PD-1 therapy

Improved therapeutic response, enhanced tumor control, and improved T cell response.

Matson et al. (2018)

Enterococcus faecium

MM patients receive Anti–PD-1 therapy

Improved therapeutic response, enhanced cancer immunity, and improved T cell response.

Matson et al. (2018)

Olsenella species

germ-free or specific-pathogen-free mice with injection of MC38 colorectal cancer cells receive anti CTLA-4 treatment

Improved therapeutic response, enhanced cancer immunity, and improved T cell response.

Mager et al. (2020) [42]

Lactobacillus johnsonii,

germ-free or specific-pathogen-free mice with injection of MC38 colorectal cancer cells receive anti CTLA-4 treatment

Improved therapeutic response, enhanced cancer immunity, and improved T cell response.

Mager et al. (2020) [42]

Holdemania filiformis

Adult MM patients receive

Ipilimumab, Nivolumab

Ipilimumab plus nivolumab, pembrolizumab

(Anti-CTLA-4 or Anti–PD-1 or combination of Anti-CTLA-4 and Anti–PD-1 therapy)

Predicted effective therapeutic response

Frankel et al. (2017) [21]

Dorea formicogenerans

Adult MM patients receive

Ipilimumab, Nivolumab

Ipilimumab plus nivolumab, pembrolizumab

(Anti-CTLA-4 or Anti–PD-1 or combination of Anti-CTLA-4 and Anti–PD-1 therapy)

Dorea formicogenerans enriched only in patients who accepted pembrolizumab and predicted effective therapeutic response

Frankel et al. (2017) [21]

Akkermansia muciniphil

NSCLC and RCC patients receive Anti-PD-L1 and Anti–PD-1

Improved therapeutic response

Routy et al. (2018) [18]

Alistipes

NSCLC and RCC patients receive Anti-PD-L1 and Anti–PD-1

Improved therapeutic response

Routy et al. (2018 )[18]

  1. Abbreviations: CTLA-4 cytotoxic T lymphocyte–associated antigen 4, MM metastatic melanomas, NSCLC non-small-cell lung cancer, UC urothelial carcinoma, PD-1 programmed cell death protein 1, PD-L1 programmed death-ligand 1, RCC renal cell carcinoma