Skip to main content

Table 1 Characteristics of prostate tumor RNA-seq datasets

From: Reference-free transcriptome signatures for prostate cancer prognosis

Study

RNA-seq library type

Reads/sample

#Tumor samples

Risk

 

Relapse

 
    

LR

HR

NO

YES

TCGA-PRAD

Poly(A)+ unstranded 2x50nt

130M

505

134

240

56

58

ICGC-PRAD

Poly(A)+ stranded 2x100nt

313M

148

40

23

49

7

STELLOO

Poly(A)+ stranded 1x65nt

20M

91

  

43

48