Table 9 For genes with at least five hemimethylation sites in tumor samples

RGS14

17

–

regulator of G protein signaling 14

MEX3A

16

–

mex-3 RNA binding family member A

WT1

11

TF, TS

WT1 transcription factor

PRDM16

10

OG, TF, TCG

PR/SET domain 16

ZDHHC9

10

–

zinc finger DHHC-type containing 9

AGAP2

8

–

ArfGAP with GTPase domain, ankyrin repeat and PH domain 2

GNAS

8

OG

GNAS complex locus

EXOC3L2

8

–

exocyst complex component 3 like 2

PTPRN2

7

–

protein tyrosine phosphatase receptor type N2

FANK1

7

–

fibronectin type III and ankyrin repeat domains 1

UNC93B1

7

–

unc-93 homolog B1, TLR signaling regulator

IGSF9B

7

–

immunoglobulin superfamily member 9B

GNAS-AS1

7

–

GNAS antisense RNA 1

MAD1L1

7

–

mitotic arrest deficient 1 like 1

TSPAN9

7

–

tetraspanin 9

PTPRM

7

–

protein tyrosine phosphatase receptor type M

TP73

6

TF

tumor protein p73

IFT140

6

–

intraflagellar transport 140

NFATC1

6

TF

nuclear factor of activated T cells 1

DGKA

6

–

diacylglycerol kinase alpha

FMNL1

6

–

formin like 1

CACNA1I

6

–

calcium voltage-gated channel subunit alpha1 I

LOC101927636

6

–

RNA Gene affiliated with the lncRNA class

HDAC4

5

TF

histone deacetylase 4

IRX2

5

TF, HP

iroquois homeobox 2

ANKRD33B

5

–

ankyrin repeat domain 33B

LINC00537

5

–

Long Intergenic Non-Protein Coding RNA 537

NOTCH1

5

OG, TCG

notch receptor 1

ANO2

5

–

anoctamin 2

CACNA1H

5

–

calcium voltage-gated channel subunit alpha1 H

RUNX3

5

TF

runt related transcription factor 3

SIX3

5

TF, HP

SIX homeobox 3

FZD7

5

–

frizzled class receptor 7

ADGRA2

5

–

adhesion G protein-coupled receptor A2

IFFO1

5

–

intermediate filament family orphan 1

CHTF18

5

–

chromosome transmission fidelity factor 18

TMEM204

5

–

transmembrane protein 204

RECQL5

5

–

RecQ like helicase 5

SMIM5

5

–

small integral membrane protein 5

MAPK1

5

PK

mitogen-activated protein kinase 1

SYN1

5

–

synapsin I