Table 10 For genes with at least five hemimethylation sites in normal samples

ZFPM1

14

TF

zinc finger protein, FOG family member 1

GNAS

13

OG

GNAS complex locus

RGPD2

12

–

RANBP2 like and GRIP domain containing 2

SHANK3

11

–

SH3 and multiple ankyrin repeat domains 3

IRX2

10

TF, HP

iroquois homeobox 2

LTB4R

9

–

leukotriene B4 receptor

CPEB3

8

–

cytoplasmic polyadenylation element binding protein 3

PTPRN2

7

–

protein tyrosine phosphatase receptor type N2

MIR1268A

7

–

microRNA 1268a

GNAS-AS1

7

–

GNAS antisense RNA 1

CYP26C1

7

–

cytochrome P450 family 26 subfamily C member 1

TBL1XR1

6

–

transducin beta like 1 X-linked receptor 1

HOXA3

6

TF, HP

homeobox A3

CACNA1H

6

–

calcium voltage-gated channel subunit alpha1 H

NPEPPS

6

–

aminopeptidase puromycin sensitive

SEMA6B

6

CGF

semaphorin 6B

HOMER3

6

–

homer scaffold protein 3

PINLYP

6

–

phospholipase A2 inhibitor and LY6/PLAUR domain containing

GDI1

6

–

GDP dissociation inhibitor 1

HS3ST2

6

–

heparan sulfate-glucosamine 3-sulfotransferase 2

PRDM16

5

TF, OG, TCG

PR/SET domain 16

PLK3

5

PK

polo like kinase 3

GREM2

5

CGF

gremlin 2, DAN family BMP antagonist

MEIS1

5

TF, HP

Meis homeobox 1

MEIS1-AS2

5

–

MEIS1 antisense RNA 2

POLH

5

–

DNA polymerase eta

HOXA-AS2

5

–

HOXA cluster antisense RNA 2

EBF3

5

–

EBF transcription factor 3

CBFA2T3

5

TF, OG, TCG

CBFA2/RUNX1 translocation partner 3

RPL13

5

–

ribosomal protein L13

NFIC

5

TF

nuclear factor I C

CDH4

5

–

cadherin 4

PDGFB

5

OG, TCG

cytokine or growth factor, platelet derived growth factor subunit B

CCNT1

5

–

cyclin T1

SNORD68

5

–

small nucleolar RNA, C/D box 68