Table 2 Selected significantly enriched signaling and cell cycle pathways (KEGG and Reactome)
ID | Description | GeneRatio | BgRatio | p.adjust |
|---|---|---|---|---|
MKN1 4 h Cet vs. MKN1 4 h untr | ||||
hsa04657 | IL-17 signaling pathway | 6/43 | 79/5844 | 0.00121677 |
hsa04668 | TNF signaling pathway | 6/43 | 102/5844 | 0.00259938 |
hsa04010 | MAPK signaling pathway | 8/43 | 272/5844 | 0.01366521 |
hsa04062 | Chemokine signaling pathway | 6/43 | 145/5844 | 0.01366521 |
NCI-N87 4 h Afa vs. NCI-N87 4 h untr | ||||
hsa04668 | TNF signaling pathway | 11/147 | 102/5844 | 0.00964085 |
NCI-N87 24 h Afa vs. NCI-N87 24 h untr | ||||
1,640,170 | Cell Cycle | 262/1891 | 462/5594 | 4.5934E-23 |
69,278 | Cell Cycle, Mitotic | 221/1891 | 380/5594 | 3.1704E-21 |
453,279 | Mitotic G1-G1/S phases | 81/1891 | 114/5594 | 8.6401E-14 |
69,242 | S Phase | 78/1891 | 110/5594 | 2.8328E-13 |
69,306 | DNA Replication | 68/1891 | 92/5594 | 5.238E-13 |
MKN1 4 h Afa vs. MKN1 4 h untr | ||||
hsa04668 | TNF signaling pathway | 10/66 | 102/5844 | 2.3777E-05 |
hsa04657 | IL-17 signaling pathway | 8/66 | 79/5844 | 0.00011952 |
hsa04010 | MAPK signaling pathway | 11/66 | 272/5844 | 0.00427566 |
hsa04064 | NF-kappa B signaling pathway | 5/66 | 82/5844 | 0.02329389 |
hsa04621 | NOD-like receptor signaling pathway | 6/66 | 140/5844 | 0.0343651 |
hsa04062 | Chemokine signaling pathway | 6/66 | 145/5844 | 0.03858289 |
168,898 | Toll-Like Receptors Cascades | 6/60 | 105/5594 | 0.0159905 |
975,155 | MyD88 dependent cascade initiated on endosome | 4/60 | 65/5594 | 0.04380237 |
975,871 | MyD88 cascade initiated on plasma membrane | 4/60 | 65/5594 | 0.04380237 |
MKN7 4 h Afa vs. MKN7 4 h untr | ||||
hsa04668 | TNF signaling pathway | 10/157 | 102/5844 | 0.02646242 |
hsa04630 | Jak-STAT signaling pathway | 14/157 | 125/5844 | 0.00112593 |
MKN7 24 h Afa vs. MKN7 24 h untr | ||||
453,279 | Mitotic G1-G1/S phases | 40/764 | 114/5594 | 3.6681E-06 |
69,278 | Cell Cycle, Mitotic | 91/764 | 380/5594 | 6.4007E-06 |
69,206 | G1/S Transition | 34/764 | 94/5594 | 7.6198E-06 |
113,510 | E2F mediated regulation of DNA replication | 16/764 | 28/5594 | 1.4565E-05 |
1,640,170 | Cell Cycle | 103/764 | 462/5594 | 1.4565E-05 |