Table 6 Gene sets enriched in phenotype high
From: Increased E2F2 predicts poor prognosis in patients with HCC based on TCGA data
MSigDB collection | Gene set name | NES | NOM p-val | FDR q-val |
|---|---|---|---|---|
c2.cp.kegg.v7.0.symbols.gmt[Curated] | KEGG_CELL_CYCLE | 2.400 | 0.000 | 0.000 |
KEGG_RNA_DEGRADATION | 2.274 | 0.000 | 0.001 | |
KEGG_PYRIMIDINE_METABOLISM | 2.273 | 0.000 | 0.001 | |
KEGG_BASE_EXCISION_REPAIR | 2.224 | 0.000 | 0.002 | |
KEGG_AMINOACYL_TRNA_BIOSYNTHESIS | 2.163 | 0.000 | 0.004 | |
KEGG_DNA_REPLICATION | 2.149 | 0.000 | 0.005 | |
KEGG_P53_SIGNALING_PATHWAY | 2.116 | 0.000 | 0.005 | |
KEGG_NUCLEOTIDE_EXCISION_REPAIR | 2.101 | 0.000 | 0.006 | |
KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS | 2.012 | 0.004 | 0.012 | |
KEGG_CITRATE_CYCLE_TCA_CYCLE | 1.995 | 0.006 | 0.013 |