Mutationa | avsnp150b | Gene.refGenec | weightsd | Sample Number in LCC(%)e | Sample Number in RCC_(%)f | P valueg |
---|---|---|---|---|---|---|
chr7_140753336_140753336_A_T | rs113488022 | BRAF | 0.12 | 2 (1.8) | 35 (20.5) | 4.72E-15 |
chr12_25245347_25245347_C_T | rs112445441 | KRAS | 0.09 | 5 (4.5) | 20 (11.7) | 4.07E-08 |
chr5_112839942_112839942_C_T | rs121913332 | APC | 0.09 | 1 (0.9) | 18 (10.5) | 2.93E-07 |
chr12_25245350_25245350_C_G | rs121913529 | KRAS | 0.09 | 1 (0.9) | 6 (3.5) | 0.02 |
chr12_25245350_25245350_C_T | rs121913529 | KRAS | 0.07 | 8 (7.1) | 26 (15.2) | 8.74E-11 |
chr17_7674220_7674220_C_T | rs11540652 | TP53 | 0.06 | 10 (8.9) | 2 (1.2) | 0.56 |
chr7_135929761_135929762_AT_A | . | LUZP6;MTPN | 0.06 | 4 (3.6) | 2 (1.2) | 0.56 |
chr3_179234297_179234297_A_G | rs121913279 | PIK3CA | 0.05 | 5 (4.5) | 7 (4.1) | 0.01 |
chr12_25245350_25245350_C_A | rs121913529 | KRAS | 0.04 | 11 (9.8) | 13 (7.6) | 3.46E-05 |
chr3_179218294_179218294_G_A | rs121913273 | PIK3CA | 0.04 | 4 (3.6) | 5 (2.9) | 0.04 |
chr12_25225628_25225628_C_T | rs121913527 | KRAS | 0.03 | 2 (1.8) | 6 (3.5) | 0.02 |
chr5_112780895_112780895_C_T | rs587781392 | APC | 0.03 | 4 (3.6) | 4 (2.3) | 0.08 |
chr5_78039082_78039083_GT_G | . | AP3B1 | 0.03 | 2 (1.8) | 10 (5.8) | 5.37E-4 |
chr15_23567535_23567536_CT_C | . | MKRN3 | 0.02 | 1 (0.9) | 15 (8.8) | 5.29E-06 |
chr17_7673802_7673802_C_T | rs28934576 | TP53 | 0.02 | 5 (4.5) | 6 (3.5) | 0.02 |
chr3_46375665_46375666_TG_T | rs939905165 | LOC102724297 | 0.02 | 0 (0) | 15 (8.8) | 5.29E-06 |
chr1_244056271_244056272_GA_G | rs972665297 | ZBTB18 | 0.02 | 2 (1.8) | 17 (9.9) | 7.77E-07 |
chr7_1747914_1747915_TA_T | . | ELFN1 | 0.02 | 2 (1.8) | 8 (4.7) | 3.08E-3 |
chr12_109581434_109581435_GC_G | . | MVK | 0.02 | 0 (0) | 11 (6.4) | 2.16E-4 |
chr4_105242265_105242266_CT_C | . | TET2-AS1 | 0.02 | 1 (0.9) | 8 (4.7) | 3.08E-3 |
chr8_13568071_13568072_CT_C | rs1014242184 | C8orf48 | 0.01 | 1 (0.9) | 14 (8.2) | 1.36E-05 |
chr17_58357799_58357800_AC_A | rs781215815 | RNF43 | 0.01 | 0 (0) | 17 (9.9) | 7.77E-07 |
chr2_68464196_68464197_AT_A | . | FBXO48 | 0.01 | 0 (0) | 9 (5.3) | 1.29E-3 |
chr4_154609909_154609910_GT_G | . | FGG | 0.01 | 0 (0) | 10 (5.8) | 5.32E-4 |
chr17_7675088_7675088_C_T | rs28934578 | TP53 | 0.01 | 10 (8.9) | 13 (7.6) | 3.46E-05 |
chr2_147926116_147926117_TA_T | rs764719749 | ACVR2A | 0.01 | 1 (0.9) | 11 (6.4) | 2.16E-4 |
chr5_112838220_112838220_C_T | rs121913333 | APC | 0.01 | 3 (2.7) | 7 (4.1) | 7.22E-3 |
chr13_108232109_108232110_CA_C | rs977361714 | ABHD13 | 0.003 | 1 (0.9) | 9 (5.3) | 1.29E-3 |
chr4_44698597_44698598_GA_G | . | GUF1 | 0.003 | 1 (0.9) | 11 (6.4) | 2.16E-4 |
chr6_98837428_98837429_CT_C | rs898072886 | POU3F2 | 0.003 | 1 (0.9) | 10 (5.8) | 5.32E-4 |